Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence96.31%DateThu Jan 5 11:48:04 GMT 2012
Rank60Aligned Residues89
% Identity10%Templatec3bjaA_
PDB info PDB header:transcription regulatorChain: A: PDB Molecule:transcriptional regulator, marr family, putative; PDBTitle: crystal structure of putative marr-like transcription regulator2 (np_978771.1) from bacillus cereus atcc 10987 at 2.38 a resolution
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.. .......80.........90.........100.........110....
Predicted Secondary structure 









...



Query SS confidence 


































. . .









































Query Sequence  PGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPR. . . IGTRVMPQSNWNFLDQELLTWWMTEENFHQVIDHFLVMRICL
Query Conservation 


  

    


 


 

  
   


     ... 
  
                                 
  
Alig confidence 


































...











....................









Template Conservation   
  


  
 
    

  
  

  
 
 
     
 
   
 

  
....................          
Template Sequence  VSXSKLIENXGCVPSNXTTXIQRXKRDGYVXTEKNPNDQRETLVYLTKKG. . . . . . . . . . . . . . . . . . . . EETKKQVDVQ
Template Known Secondary structure 
SS

TTTTS
SS
TT

....................
Template Predicted Secondary structure 

















....................
Template SS confidence 















































































   47..50.........60.........70.........80.........90...... ...100......
 
   115....120.........130.........140......
Predicted Secondary structure 

Query SS confidence 































Query Sequence  EPQACLLAATVGTAEQKAHLNTLMAEMAALKE
Query Conservation 
                  
            
Alig confidence 































Template Conservation             
  

   
   
  
   

Template Sequence  YSDFLKENCGCFTKEEEGILEDLLLKWKKHLN
Template Known Secondary structure 

S

Template Predicted Secondary structure 





Template SS confidence 































   107..110.........120.........130........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions