Job Description P31475 Confidence 62.61% Date Thu Jan 5 11:48:04 GMT 2012 Rank 311 Aligned Residues 103 % Identity 13% Template c2zhhA_ PDB info PDB header:transcription Chain: A: PDB Molecule:redox-sensitive transcriptional activator soxr; PDBTitle: crystal structure of soxr Resolution 3.20 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.		110	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		G	E	I	E	L	G	E	Q	F	G	V	S	R	T	A	V	R	E	A	V	K	T	L	T	A	K	G	M	V	L	P	R	P	R	I	G	T	R	V	M	P	Q	S	N	W	N	F	L	D	Q	E	L	L	T	W	W	M	T	E	E	N	F	H	Q	V	I	D	H	F	L	V	.	M	R	I	C	L	E	P	Q
Query Conservation																																																																									.
Alig confidence																					.	.	.	.																.																																	.
Template Conservation																					.	.	.	.																.
Template Sequence		T	P	G	E	V	A	K	R	S	G	V	A	V	S	A	L	H	F	Y	.	.	.	.	E	S	K	G	L	I	T	S	I	R	N	S	G	N	Q	.	R	R	Y	K	R	D	V	L	R	Y	V	A	I	I	K	I	A	Q	R	I	G	I	P	L	A	T	I	G	E	A	F	G	V	T	L	S	A	K	E	W	K
Template Known Secondary structure											T	S									.	.	.	.			T	T	S	S						T	T	T		.					T	T														T	T										T	T
Template Predicted Secondary structure																					.	.	.	.																.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.					.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	L	L	A	A	T	V	G	T	A	E	Q	K	A	H	L	N	T	L	M	A	E	M	A	A	L	K	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	L	S	S	Q	W	R	E	E	L	D	R	R	I	H	T	L	V	A	L	R	D	E	L	D	G	C	I	G
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions