Return to main results Retrieve Phyre Job Id

Job DescriptionP31475
Confidence85.60%DateThu Jan 5 11:48:04 GMT 2012
Rank209Aligned Residues43
% Identity26%Templatec1q1hA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:transcription factor e; PDBTitle: an extended winged helix domain in general transcription2 factor e/iie alpha
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70... ....
Predicted Secondary structure 














.
Query SS confidence 







































.



Query Sequence  GTILPGEIELGEQFGVSRTAVREAVKTLTAKGMVLPRPRI. GTRV
Query Conservation 
  



  

    


 


 

  
   


      .
  
Alig confidence 



.


































.



Template Conservation    
 .






  




 


 

 


  

 


 
 

 
Template Sequence  GTEM. TDEEIANQLNIKVNDVRKKLNLLEEQGFVSYRKTRSGWFI
Template Known Secondary structure 
S
B.
TTTS
TS





Template Predicted Secondary structure 



.










Template SS confidence 












































   31... .....40.........50.........60.........70....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions