Job Description P31475 Confidence 87.98% Date Thu Jan 5 11:48:04 GMT 2012 Rank 200 Aligned Residues 47 % Identity 19% Template c1hlvA_ PDB info PDB header:dna binding protein/dna Chain: A: PDB Molecule:major centromere autoantigen b; PDBTitle: crystal structure of cenp-b(1-129) complexed with the cenp-2 b box dna Resolution 2.50 Å

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Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	L	S	A	Q	Q	L	A	A	Q	K	N	L	S	Y	V	L	A	E	K	L	A	Q	R	I	L	K	G	E	Y	E	P	G	T	I	L	P	G	E	I	E	L	G	E	Q	F	G	V	S	R	T	A	V	R	E	A	V	K
Query Conservation
Alig confidence														.	.											.	.	.	.	.	.	.	.	.					.
Template Conservation														.	.											.	.	.	.	.	.	.	.	.					.
Template Sequence		M	G	P	K	R	R	Q	L	T	F	R	E	.	.	K	S	R	I	I	Q	E	V	E	E	.	.	.	.	.	.	.	.	.	N	P	D	L	.	R	K	G	E	I	A	R	R	F	N	I	P	P	S	T	L	S	T	I	L	K
Template Known Secondary structure					S	S								.	.											.	.	.	.	.	.	.	.	.		T	T	S	.										T
Template Predicted Secondary structure														.	.											.	.	.	.	.	.	.	.	.					.
Template SS confidence
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No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions