|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | |
|
|
. | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | P | Q | Q | I | E | L | R | N | I | A | L | Q | A | . |
. |
. |
A | Q | P | L | V | H | G | V | S | L | T | L | Q | R | G | R | V | L | A | L | V | G | G | S | G | S | G | K | S | L | T | C | A | A | T | L | G | I | L | P | A | G | V | R | Q | T | A | G | E | I | L | A | D | G | K | P | V | S | P | C | A | L | R |
Query Conservation |   |
|   |   |   |
|   |   |   |
|
|
|   |   |   | . | . | . |   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   | . |
|   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   |   |
|
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|   | . | . | . | . |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
M | V | R | . |
I | I | V | K | N | V | S | K | V | F | K | K | G | K | V | V | A | L | D | N | V | N | I | N | I | E | N | G | E | R | F | G | I | L | G | P | S | G | A | G | K | T | T | F | M | R | I | I | A | G | L | . |
. |
. |
. |
D | V | P | S | T | G | E | L | Y | F | D | D | R | L | V | A | S | N | G | K | L |
Template Known Secondary structure |   |
|
|
| . |  |  |  |  |  |  |  |  |  |  | G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | . | . | . | S |
|
| S |  |  |  |  |  |  | T | T |  |  |  |  |  | T | T |  |  |
Template Predicted Secondary structure |   |
|
|  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | |
. | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | |
|
|
|
. | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
78 | . | |
|
|
|
|
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | I | . |
. |
. |
. |
. |
K | I | A | T | I | M | Q | N | P | R | S | A | F | N | P | L | H | T | M | H | T | H | A | R | E | T | C | L | A | L | G | K | P | A | D | D | A | T | L | T | A | A | I | E | A | V | G | L | E | N | A | A | R | V | L | K | L | Y | P | F | E | M | S | G | G | M | L | Q | R | M | M | I | A |
Query Conservation |   |
  |   | . | . | . | . | . |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|
|   |
|
|
Alig confidence |   |
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   | . | . |   |
|   |   |   |   |
|
|   |
|   |
|   |   |   |   |   |   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|
Template Sequence |   |
I | V | P | P | E | D | R | K | I | G | M | V | F | Q | T | W | . |
. |
A | L | Y | P | N | L | T | A | F | E | N | I | A | F | P | L | T | N | M | K | M | . |
S | K | E | E | I | R | K | R | V | E | E | V | A | K | I | L | D | I | H | H | V | L | N | H | F | P | R | E | L | S | G | A | Q | Q | Q | R | V | A | L | A |
Template Known Secondary structure |   |
S | S |
| G | G | G | S |
|  |  |  |  |  | T | T | S | . | . |
|
|
| T | T | S |
|  |  |  |  |  |  | G | G | G | T | T | S | S |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | T | T | S |
| G | G | G | S |
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
| . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | |
. | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | V | L | C | E | S | P | F | I | I | A | D | E | P | T | T | D | L | D | V | V | A | Q | A | R | I | L | D | L | L | E | S | I | M | Q | K | Q | A | P | G | M | L | L | V | T | H | D | M | G | V | V | A | R | L | A | D | D | V | A | V | M | S | D | G | K | I | V | E | Q | G | D | V | E | T | L | F | N | A | P |
Query Conservation |   |
  |
|
|   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |   |   |
|   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |
|
|   |   |
|   |   |   |   |
|   |   |   |   |
Template Sequence |   |
R | A | L | V | K | D | P | S | L | L | L | L | D | E | P | F | S | N | L | D | A | R | M | R | D | S | A | R | A | L | V | K | E | V | Q | S | R | L | G | V | T | L | L | V | V | S | H | D | P | A | D | I | F | A | I | A | D | R | V | G | V | L | V | K | G | K | L | V | Q | V | G | K | P | E | D | L | Y | D | N | P |
Template Known Secondary structure |   |
 |  |  | T | T |
|
| S |  |  |  |  |  | S | T | T | T | T | S |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
|  |  |  |  |  |  | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |
  |   |
233 | . | . | . | . | . | . | 240 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | H | T | V | T | R | S | L | V | S |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
V | S | I | Q | V | A | S | L | I | G |
Template Known Secondary structure |   |
S | S |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
  |   |
233 | . | . | . | . | . | . | 240 | . | . |
  |