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Job DescriptionP33593
Confidence98.20%DateThu Jan 5 11:52:18 GMT 2012
Rank89Aligned Residues120
% Identity22%Templatec3thxB_
PDB info PDB header:dna binding protein/dnaChain: B: PDB Molecule:dna mismatch repair protein msh3; PDBTitle: human mutsbeta complexed with an idl of 3 bases (loop3) and adp
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30.........40.........50 .........60.........70.........80......
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Query Sequence  AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATL. . . . . . . . GILPAGVRQTAGEILADGKPVSPCALRGIKIATIMQ
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Template Sequence  DQYVPNNTDLSEDSERVMIITGPNMGGKSSYIKQVALITIMAQIG. . . . . . . . . . . . . . . . . . . . SYVPAEEATIGIV. .
Template Known Secondary structure  SSS


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   866...870.........880.........890.........900.........910 .........920...
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  NPRSAFNPLHTMHTHARETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFIIADE
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Template Sequence  . . DGIFTRM. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . STFMEELTDTAEIIRKA. TSQSLVILDE
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   924.....930 .........940....... ..950.......
 
   167..170.........180.........190 .........200..
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Query Sequence  PTTDLDVVAQARILDLLESIMQKQ. APGMLLVTHDMG
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Template Sequence  LGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPP
Template Known Secondary structure  TTTTS
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   968.970.........980.........990.........1000....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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