Job Description P33593 Confidence 99.74% Date Thu Jan 5 11:52:18 GMT 2012 Rank 64 Aligned Residues 190 % Identity 11% Template c3a4mB_ PDB info PDB header:transferase Chain: B: PDB Molecule:l-seryl-trna(sec) kinase; PDBTitle: crystal structure of archaeal o-phosphoseryl-trna(sec)2 kinase Resolution 1.79 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		V	L	A	L	V	G	G	S	G	S	G	K	S	L	T	C	A	A	T	L	G	I	L	P	A	G	V	R	Q	T	A	G	E	I	L	A	D	G	K	P	V	S	P	C	A	L	R	G	I	K	.	I	A	T	I	M	Q	N	P	R	S	A	F	N	P	L	H	T	M	H	T	H	A	R	E	T	C	L	A	L
Query Conservation																																																				.
Alig confidence																							.	.	.	.																										.
Template Conservation																							.	.	.	.
Template Sequence		L	I	I	L	T	G	L	P	G	V	G	K	S	T	F	S	K	N	L	A	K	.	.	.	.	I	L	S	K	N	N	I	D	V	I	V	L	G	S	D	L	I	R	E	S	F	P	V	W	K	E	K	Y	E	E	F	I	K	K	S	T	Y	R	L	I	D	S	A	L	K	N	Y	W	V	I	V	D	D	T	N
Template Known Secondary structure									T	T	S	S											.	.	.	.					T	T								T					T	T	S	S	S			T	T																		T	T	S						S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.										.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.
Query Sequence		G	K	P	A	D	D	A	T	L	T	A	A	I	E	A	V	G	L	E	N	A	A	R	V	L	K	L	Y	P	F	E	M	S	G	G	M	L	Q	R	.	.	.	.	.	.	.	.	.	M	M	I	A	M	A	V	L	C	E	S	P	F	I	I	A	D	E	P	T	T	D	L	D	V	V	A	Q	A	R	I	L
Query Conservation																																									.	.	.	.	.	.	.	.	.
Alig confidence																																									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	Y	N	S	M	R	R	D	L	I	N	I	A	K	K	Y	N	K	N	Y	A	I	I	Y	L	K	A	S	L	D	V	L	I	R	R	N	I	E	R	G	E	K	I	P	N	E	V	I	K	K	M	Y	E	K	F	D	E	P	G	K	K	Y	K	W	D	E	P	F	L	I	I	D	T	T	K	D	I	D	F	N
Template Known Secondary structure			S														T	T																						T	T		S	S															T	T	S	S		G	G	G			S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		D	L	L	E	S	I	M	Q	K	Q	A	P	G	M	L	L	V	T	H	D	M	G	V	V	A	R	L	A	D	D	V	A	.	.	V	M	S	D	G	K	I	V	E	Q	G	D	V	E
Query Conservation																																		.	.
Alig confidence												.	.																					.	.
Template Conservation												.	.
Template Sequence		E	I	A	K	K	L	I	E	K	S	.	.	K	E	I	P	K	F	N	I	S	D	K	I	D	K	E	T	R	K	I	V	S	E	Y	I	K	S	K	K	L	D	K	D	K	I	K	E
Template Known Secondary structure												.	.	T	S																									T	T
Template Predicted Secondary structure												.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.			.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions