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Job DescriptionP33593
Confidence100.00%DateThu Jan 5 11:52:18 GMT 2012
Rank8Aligned Residues232
% Identity26%Templatec2it1B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:362aa long hypothetical maltose/maltodextrin PDBTitle: structure of ph0203 protein from pyrococcus horikoshii
Resolution1.94 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   5....10...... ...20.........30.........40.........50.........60.........70.........80...
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Query Sequence  IELRNIALQAAQ. PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAATLGILPAGVRQTAGEILADGKPVSPCALRGIKIAT
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Template Sequence  IKLENIVKKFGNFTALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGI. . . . YKPTSGKIYFDEKDVTELPPKDRNVGL
Template Known Secondary structure  TT
TT


TTSSTS....S

STT
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   4.....10.........20.........30.........40.........50.. .......60.........70.........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  IMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESPFII
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Template Sequence  VFQ. . NWALYPHMTVYKNIAFPLE. LRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLL
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T..T



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GGGS
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   80.. .......90.........100. ........110.........120.........130.........140.........150......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  ADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSDGKIVEQGDVETLFNAPKHTVTRSLVSA
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Template Sequence  LDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYKFVGGFLGN
Template Known Secondary structure  SGGGGS
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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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