Job Description P33593 Confidence 100.00% Date Thu Jan 5 11:52:18 GMT 2012 Rank 21 Aligned Residues 227 % Identity 27% Template c2hydB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter homolog; PDBTitle: multidrug abc transporter sav1866 Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.				.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		P	Q	Q	I	E	L	R	N	I	A	L	Q	A	.	.	.	A	Q	P	L	V	H	G	V	S	L	T	L	Q	R	G	R	V	L	A	L	V	G	G	S	G	S	G	K	S	L	T	C	A	A	T	L	G	I	L	P	A	G	V	R	Q	T	A	G	E	I	L	A	D	G	K	P	V	S	P	C	A	L	R	G
Query Conservation															.	.	.
Alig confidence															.	.	.																																							.	.	.	.
Template Conservation																																																								.	.	.	.
Template Sequence		Q	G	R	I	D	I	D	H	V	S	F	Q	Y	N	D	N	E	A	P	I	L	K	D	I	N	L	S	I	E	K	G	E	T	V	A	F	V	G	M	S	G	G	G	K	S	T	L	I	N	L	I	P	R	F	.	.	.	.	Y	D	V	T	S	G	Q	I	L	I	D	G	H	N	I	K	D	F	L	T	G	S
Template Known Secondary structure		S												S		S	S	S			S										T	T								S	T	T	S	S						T	T	T	T	T	S	.	.	.	.	S			S							T	T			G	G	G	S
Template Predicted Secondary structure																																																								.	.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		79	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.																																																.	.	.	.	.	.	.	.
Query SS confidence				.	.																																																.	.	.	.	.	.	.	.
Query Sequence		I	K	.	.	I	A	T	I	M	Q	N	P	R	S	A	F	N	P	L	H	T	M	H	T	H	A	R	E	T	C	L	A	L	G	K	P	A	D	D	A	T	L	T	A	A	I	E	A	V	G	L	.	.	.	.	.	.	.	.	E	N	A	A	R	V	L	K	L	Y	P	F	E	M	S	G	G	M	L	Q	R
Query Conservation				.	.																																																.	.	.	.	.	.	.	.
Alig confidence				.	.									.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		L	R	N	Q	I	G	L	V	Q	Q	D	N	.	.	.	.	.	.	.	I	L	F	S	D	T	V	K	E	N	I	L	L	G	R	P	T	A	T	D	E	E	V	V	E	A	A	K	M	A	N	A	H	D	F	I	M	N	L	P	Q	G	Y	D	T	E	V	G	E	R	G	V	K	L	S	G	G	Q	K	Q	R
Template Known Secondary structure					T						S	S		.	.	.	.	.	.	.				S	S	B						G	G	G		S	S													T	T							T	S	T	T	G	G	G		B			G	G	G	T	T	S
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.								.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	I	A	M	A	V	L	C	E	S	P	F	I	I	A	D	E	P	T	T	D	L	D	V	V	A	Q	A	R	I	L	D	L	L	E	S	I	M	Q	K	Q	A	P	G	M	L	L	V	T	H	D	M	G	V	V	A	R	L	A	D	D	V	A	V	M	S	D	G	K	I	V	E	Q	G	D	V	E	T	L
Query Conservation
Alig confidence																																								.	.																			.
Template Conservation																																								.	.																			.
Template Sequence		L	S	I	A	R	I	F	L	N	N	P	P	I	L	I	L	D	E	A	T	S	A	L	D	L	E	S	E	S	I	I	Q	E	A	L	D	V	L	.	.	S	K	D	R	T	T	L	I	V	A	H	R	L	S	T	I	T	H	.	A	D	K	I	V	V	I	E	N	G	H	I	V	E	T	G	T	H	R	E	L
Template Known Secondary structure													S						S	T	T	T	T																	.	.	T	T	T	S							S	S	G	G	G	T	T	T	.		S							T	T
Template Predicted Secondary structure																																								.	.																			.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.			.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.		.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	A	P	K	H	T	V	T	R	S	L	V	S	A	H
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		I	A	.	.	K	Q	G	A	Y	E	H	L	Y	S	I	Q
Template Known Secondary structure				.	.	T	T	S							T	T	T
Template Predicted Secondary structure				.	.
Template SS confidence
		563	.			.	.	.	.	.	570	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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