Job Description P33593 Confidence 100.00% Date Thu Jan 5 11:52:18 GMT 2012 Rank 44 Aligned Residues 217 % Identity 22% Template c2ghiD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	P	Q	Q	I	E	L	R	N	I	A	L	Q	A	A	Q	P	L	V	H	G	V	S	L	T	L	Q	R	G	R	V	L	A	L	V	G	G	S	G	S	G	K	S	L	T	C	A	A	T	L	G	I	L	P	A	G	V	R	Q	T	A	G	E	I	L	A	D	G	K	P	V	S	P	C	A	L	R	G	I	K
Query Conservation
Alig confidence																.																																					.	.	.	.	.
Template Conservation																.																																					.	.	.	.	.
Template Sequence		F	G	V	N	I	E	F	S	D	V	N	F	S	Y	.	H	R	T	L	K	S	I	N	F	F	I	P	S	G	T	T	C	A	L	V	G	H	T	G	S	G	K	S	T	I	A	K	L	L	Y	R	.	.	.	.	.	F	Y	D	A	E	G	D	I	K	I	G	G	K	N	V	N	K	Y	N	R	N	S	I	R
Template Known Secondary structure		T														.			S										T	T								S	T	T	S	S									T	T	.	.	.	.	.	S	S									T	T			G	G	G	S
Template Predicted Secondary structure																.																																					.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
				81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.																																																									.	.
Query SS confidence		.	.																																																									.	.
Query Sequence		.	.	I	A	T	I	M	Q	N	P	R	S	A	F	N	P	L	H	T	M	H	T	H	A	R	E	T	C	L	A	L	G	K	P	A	D	D	A	T	L	T	A	A	I	E	A	V	G	L	E	N	A	A	R	V	L	K	L	.	.	Y	P	F	E	M	S	G	G	M	L	Q	R	M	M	I	A	M	A	V	L
Query Conservation		.	.																																																									.	.
Alig confidence		.	.									.	.	.	.	.	.	.																																										.	.
Template Conservation												.	.	.	.	.	.	.
Template Sequence		S	I	I	G	I	V	P	Q	D	T	.	.	.	.	.	.	.	I	L	F	N	E	T	I	K	Y	N	I	L	Y	G	K	L	D	A	T	D	E	E	V	I	K	A	T	K	S	A	Q	L	Y	D	F	I	E	A	L	P	K	K	W	D	T	I	V	L	S	G	G	E	R	Q	R	I	A	I	A	R	C	L	L
Template Known Secondary structure		T	T						S	S		.	.	.	.	.	.	.				S	S	B							T	T	S	T	T													T	T								S	T	T	G	G	G		B
Template Predicted Secondary structure												.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.								.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	E	S	P	F	I	I	A	D	E	P	T	T	D	L	D	V	V	A	Q	A	R	I	L	D	L	L	E	S	I	M	Q	K	Q	A	P	G	M	L	L	V	T	H	D	M	G	V	V	A	R	L	A	D	D	V	A	V	M	S	D	G	K	I	V	E	Q	G	D	V	E	T	L	F	N	A	P	K	H	T	V
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.								.															.																										.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.								.															.																										.	.
Template Sequence		K	D	P	K	I	V	I	F	D	D	S	K	T	E	Y	L	.	.	.	.	.	.	.	.	.	.	F	Q	K	A	V	E	D	.	N	R	T	L	I	I	I	A	H	R	L	S	T	I	.	S	S	A	E	S	I	I	L	L	N	K	G	K	I	V	E	K	G	T	H	K	D	L	L	K	.	.	L	N	G	E
Template Known Secondary structure		T			S													.	.	.	.	.	.	.	.	.	.								.									S	S	G	G	G	S	.	T	T		S							T	T														.	.		T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.								.															.																										.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.
		237	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	S	L	V	S	A	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	E	M	W	N	M	Q
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions