Job Description P33593 Confidence 98.34% Date Thu Jan 5 11:52:18 GMT 2012 Rank 87 Aligned Residues 159 % Identity 12% Template c1wxqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp binding protein from pyrococcus horikoshii2 ot3 Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.																			.	90	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	A	L	V	G	G	S	G	S	G	K	S	L	T	C	A	A	T	L	G	I	L	P	A	G	V	R	Q	T	A	G	E	I	L	A	D	G	K	P	V	S	P	C	A	L	R	G	I	K	I	A	T	I	M	Q	N	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	A	F
Query Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.
Template Sequence		E	I	G	V	V	G	K	P	N	V	G	K	S	T	F	F	S	A	A	T	L	.	.	.	.	.	A	N	V	G	V	T	Y	A	I	T	D	H	P	C	K	E	L	G	C	S	P	N	P	Q	N	Y	E	Y	R	N	G	L	A	L	I	P	V	K	X	V	D	V	A	F	L	D	D	L	R	X	A	S	A	L
Template Known Secondary structure									T	T	S	S											.	.	.	.	.													S		S	S	S			S				S	S	S				T	T																S	S	T	T		S
Template Predicted Secondary structure																							.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.						.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.																		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	L	H	T	M	H	T	H	A	R	E	T	C	L	A	L	G	K	P	A	D	D	A	T	L	T	A	A	I	E	A	V	G	L	E	N	A	A	R	V	L	K	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	E	M	S	G	G	M	L	Q	R	M	M	I	A	M	A	V
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	H	V	V	D	A	T	G	K	T	D	P	E	G	Q	P	T	D	Y	H	D	P	V	E	D	I	E	F	L	E	R	E	I	D	Y	W	I	Y	G	I	L	S	K	G	W	D	K	F	A	K	R	I	K	L	Q	K	I	K	L	E	S	A	I	A	E	H	L	S	G	I	G	V	N	E	N	D	V	W	E	A
Template Known Secondary structure							T	T			B		T	T	S		B		S																									T	T	T					S	T	T	T	S	S												T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	C	E	S	P	F	I	I	A	D	E	P	T	T	D	L	D	V	V	A	Q	A	R	I	L	D	L	L	E	S	I	M	Q	K	Q	A	P	G	M	L	L	V	T	H	D
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		X	H	K	L	N	L	P	E	D	P	T	K	W	S	Q	D	D	L	L	A	.	.	.	.	.	.	F	A	S	E	I	R	R	V	N	K	P	X	V	I	A	A	N	K	A
Template Known Secondary structure					T	T			S		G	G	G									.	.	.	.	.	.										S									G
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.							.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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