Job Description P33593 Confidence 98.13% Date Thu Jan 5 11:52:18 GMT 2012 Rank 93 Aligned Residues 137 % Identity 18% Template c1ewqA_ PDB info PDB header:replication/dna Chain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure taq muts complexed with a heteroduplex2 dna at 2.2 a resolution Resolution 2.20 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	G	V	S	L	T	L	Q	R	G	R	V	L	A	L	V	G	G	S	G	S	G	K	S	L	T	C	A	A	T	L	G	I	L	P	A	G	V	R	Q	T	A	G	E	I	L	A	D	G	K	P	V	S	P	C	A	L	R	G	I	K	I	A	T	I	M	Q	N	P	R	S	A	F	N	P	L	H	T	M	H
Query Conservation
Alig confidence								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Conservation								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template Sequence		N	D	L	E	X	A	.	.	.	H	E	L	V	L	I	T	G	P	N	X	A	G	K	S	T	F	L	R	Q	T	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	L	L	A	Q	.	.	V	G	S	F	V	P	A	E	E	A	H
Template Known Secondary structure							S	.	.	.	S							S		S	S	S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	.	.	T	T			B	S	S	S
Template Predicted Secondary structure								.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.
Template SS confidence
		570	.	.	.	.	.				.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.																														.	600	.	.	.	.			.	.	.	.	.	610	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	A	R	E	T	C	L	A	L	G	K	P	A	D	D	A	T	L	T	A	A	I	E	A	V	G	L	E	N	A	A	R	V	L	K	L	Y	P	F	E	M	S	G	G	M	L	Q	R	M	M	I	A	M	A	V	L	C	E	S	P	F	I	I	A	D	E	P	T	T	D	L	D	V	V	A	Q	A	R	I
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	P	L	F	D	G	I	Y	T	R	I	G	A	G	K	S	T	F	X	V	E	X	E	E	V	A	L	I	L	K	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	N	S	L	V	L	L	D	E	V	G	R	G	T	S	S	L	D	G	V	A	I
Template Known Secondary structure						S											S																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T							S	T	T	T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.																										.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	L	L	E	S	I	M	Q	K	Q	A	P	G	M	L	L	V	T	H	D	M	G	V	V	A	R	L	A	D	D	V	A	V	M	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	T	A	V	A	E	A	L	H	E	R	R	A	Y	T	L	F	A	T	H	Y	F	E	L	T	A	L	G	L	P	R	L	K	N	L	H
Template Known Secondary structure													T														T				T	T
Template Predicted Secondary structure
Template SS confidence
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions