 |
| Job Description | P23894 | | Confidence | 67.75% | Date | Thu Jan 5 11:40:27 GMT 2012 |
| Rank | 77 | Aligned Residues | 65 |
| % Identity | 20% | Template | c3se6A_ |
| PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:endoplasmic reticulum aminopeptidase 2; |
PDBTitle: crystal structure of the human endoplasmic reticulum aminopeptidase 2
|
| Resolution | 3.08 Å |
|
| | |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | |
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | |
|
|
| . | . |
|
|
|  | | | | |  |
|
|
|
|
| | | | |
|
|
|
|
|
|
| | | | |
| | | | | . | . | . | . | . | . | . | | |
|
| | | | | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
R | W | L | V | N | T | V | A | T | Q | A | R | Q | A | G | I | . |
. |
A | M | P | Q | V | A | I | Y | H | A | P | D | I | N | A | F | A | T | G | A | R | R | D | A | S | L | V | A | V | S | T | G | L | L | . |
. |
. |
. |
. |
. |
. |
Q | N | M | S | P | D | E | A | E | A | V | I | A | H | E | I | S | H |
| Query Conservation | |
| |
| | | |
| | |
| | | | | | | . | . | | |
| |
| |
| | | | | | |
|
| | | |
| | | | | | | |
| |
| | | |
|
| . | . | . | . | . | . | . | | |
| | | |
|
| |
|
|
|
|
|
|
|
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | |
| | | |
| | | |
| | |
|
| | |
|
|
| |
| | |
| | | | |
| |
|
| . | . | . |
| |
|
|
| | | | | | |
|
| | | | | | | | | | | | | | | | | |
|
|
|
|
|
|
|
| Template Sequence | |
Q | A | S | L | K | L | L | D | F | Y | E | K | Y | F | D | I | Y | Y | P | L | S | K | L | D | L | I | A | I | P | D | F | A | P | G | A | M | E | . |
. |
. |
N | W | G | L | I | T | Y | R | E | T | S | L | L | F | D | P | K | T | S | S | A | S | D | K | L | W | V | T | R | V | I | A | H | E | L | A | H |
| Template Known Secondary structure | |
| | | | | | | | | | | | | | T |
|
|
|
| S | S | | | | | | | | S | S |
| S | S | S | | |
| . | . | . |
| T | T | | | | | | G | G | G | T |
|
|
| T | T | T |
|
| | | | | | | | | | | | | | | | G | G |
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | |
|
|
|
|
|
|
|
|
|
| | | | |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| | | | |
|
|
|
| | |
|
|
|
|
|
|
| | | | | | | | | | | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
301 | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | |
|
|
. | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
