Job Description P23894 Confidence 96.95% Date Thu Jan 5 11:40:27 GMT 2012 Rank 3 Aligned Residues 102 % Identity 15% Template c3dtkA_ PDB info PDB header:gene regulation Chain: A: PDB Molecule:irre protein; PDBTitle: crystal structure of the irre protein, a central regulator2 of dna damage repair in deinococcaceae Resolution 3.24 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	T	Q	A	R	Q	A	G	I	A	M	P	Q	V	A	I	Y	H	A	P	D	I	N	A	F	A	T	G	A	R	R	D	A	S	L	V	A	V	S	T	G	L	L	Q	N	M	S	P	D	E	A	E	A	V	I	A	H	E	I	S	H	I	A	N	G	D	M	V	T	M	T	L	I	Q	G	V	V	N	T
Query Conservation
Alig confidence													.	.																.	.	.											.	.	.	.																													.	.	.	.	.	.	.
Template Conservation													.	.																.	.	.											.	.	.	.																													.	.	.	.	.	.	.
Template Sequence		T	H	S	L	M	H	G	L	D	G	I	.	.	T	L	T	F	M	P	M	G	Q	R	D	G	A	Y	D	.	.	.	P	E	H	H	V	I	L	I	N	S	.	.	.	.	Q	V	R	P	E	R	Q	R	F	T	L	A	H	E	I	S	H	A	L	L	L	G	D	D	D	L	L	S	.	.	.	.	.	.	.
Template Known Secondary structure								T	S	T	T		.	.								S	S							.	.	.	T	T	T	T						S	.	.	.	.	S	S																											.	.	.	.	.	.	.
Template Predicted Secondary structure													.	.																.	.	.											.	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.			.	.	.	.	.	50	.	.	.	.	.	.	.	.	.				60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	I	F	I	S	R	I	L	A	Q	L	A	A	G	F	M	G	G	N	R	D	E	G	E	E	S	N	G	N	P	L	I	Y	F	A	V	A	T	V	L	E	L	V	F	G	I	L	A	S	I	I	T	M	W	F	S	R	H	R	E	F	H	A	D	A	G	S	A	K	L	V	G	R	E	K	M	I	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	H	D	E	Y	E	G	D	R	L	E	Q	V	I	E	T	L	C	N	V	G	A	A	A	L	L	M	P	A	E	L	I	D	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T			T																				S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																															98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		242	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		133	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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