Return to main results Retrieve Phyre Job Id

Job DescriptionP33340
Confidence5.27%DateThu Jan 5 11:51:38 GMT 2012
Rank26Aligned Residues28
% Identity21%Templatec2aukA_
PDB info PDB header:transferaseChain: A: PDB Molecule:dna-directed rna polymerase beta' chain; PDBTitle: structure of e. coli rna polymerase beta' g/g' insert
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   310.........320.........330.......
Predicted Secondary structure 







Query SS confidence 



























Query Sequence  TTVSIPITASYYVYDTNKVKSGALEATA
Query Conservation      


 


       
  
   
 
Alig confidence 



























Template Conservation    
 

 

 
 
  
  
  





 
Template Sequence  AQYFLPGKAIVQLEDGVQISSGDTLARI
Template Known Secondary structure 


TT
SS
TT

TT
Template Predicted Secondary structure 












Template SS confidence 



























   158.160.........170.........180.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions