Job Description P33340 Confidence 99.91% Date Thu Jan 5 11:51:38 GMT 2012 Rank 1 Aligned Residues 263 % Identity 16% Template c1klfP_ PDB info PDB header:chaperone/adhesin complex Chain: P: PDB Molecule:fimh protein; PDBTitle: fimh adhesin-fimc chaperone complex with d-mannose Resolution 2.79 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	Q	H	N	L	V	V	Q	G	D	F	A	L	T	Q	T	Q	M	A	T	Y	E	H	N	F	N	D	S	S	C	V	S	T	N	T	I	T	P	M	S	P	S	D	I	I	V	G	L	Y	N	D	T	I	K	L	N	L	H	F	E	W	T	N	K	N	N	I	T	L	S	N	N	Q	T	S	F	T	S	G
Query Conservation
Alig confidence																																.	.	.	.																																										.	.	.	.	.
Template Conservation																																.	.	.	.																																										.	.	.	.	.
Template Sequence		S	A	N	V	Y	V	N	L	A	P	V	V	N	V	G	Q	N	L	V	V	D	L	S	T	Q	I	F	C	H	N	.	.	.	.	D	Y	P	E	T	I	T	D	Y	V	T	L	Q	R	G	S	A	Y	G	G	V	L	S	N	F	S	G	T	V	K	Y	S	G	S	S	Y	P	F	P	T	T	.	.	.	.	.
Template Known Secondary structure					B						S	B			T	T	S							T	T	T						.	.	.	.	S	S	T	T	T																											S	S	S				S	S		S	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.																																										.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	V	T	V	T	P	A	A	S	N	A	K	V	N	V	S	A	G	G	G	G	S	V	M	I	N	G	V	A	T	L	S	S	A	S	S	S	T	R	G	S	A	A	V	Q	F	L	L	C	L	L	G	G	K	S	W	D	A	C	V	N	S	Y	R	N	A	L	A	Q	N	A	G	V	Y	S	F	N	L	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	S	E	T	P	R	V	V	Y	N	S	R	T	D	K	P	W	P	V	A	L	Y	L	T	P	V	S	S	A	G	G	V	A	I	K	A	G	.	.	.	.	.	.	S	L	I	A	V	L	I	L	R	Q	T	N	N	Y	N	S	D	D	F	Q	F	V	W	N	I	Y	A	N	N	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	S										S	S														T	T			S					S	S	.	.	.	.	.	.													S	S	S	S												S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
										88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.							.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	Y	N	P	I	T	T	T	C	K	P	D	D	L	L	I	T	L	D	S	I	P	V	S	Q	L	P	A	T	G	N	K	A	T	I	N	S	K	Q	G	D	I	I	L	R	C	K	N	L	L	G	Q	Q	N	Q	T	S	R	K	M	Q	V	Y	L	S	S	S	D	L	L	T	N	S	N	T	I	L	K	G
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Sequence		V	V	V	P	T	G	G	C	D	V	S	A	R	D	V	T	V	T	L	P	D	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	V	P	I	P	L	T	V	Y	C	A	K	S	Q	N	L	G	Y	Y	L	S	G	T	T	A	D	A	G	N	S	I	F	T	.	.	.	.	.	N	T	A	S	F
Template Known Secondary structure															S							S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.		B										S	S												B	S	S	S	S	S		S	B		.	.	.	.	.					S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.														.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	D	N	G	V	G	F	I	L	E	S	N	G	S	P	V	T	L	L	N	I	T	N	S	S	K	G	Y	T	N	L	K	E	V	A	A	K	S	K	L	T	D	T	T	V	S	I	P	I	T	A	S	Y	Y	V	Y	D	T	N	K	V	K	S	G	A	L	E	A	T	A	L	I	N	V	K	Y	D
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		S	P	A	Q	G	V	G	V	Q	L	T	R	N	G	T	I	I	P	A	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	S	L	G	A	V	G	T	S	A	V	S	L	G	L	T	A	N	Y	A	R	T	G	.	G	Q	V	T	A	G	N	V	Q	S	I	I	G	V	T	F	V	Y	Q
Template Known Secondary structure		S			S	S								T	T					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.								S	S	S						B								S	.	S				S	S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.														.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions