Job Description P26608 Confidence 9.00% Date Thu Jan 5 11:42:58 GMT 2012 Rank 23 Aligned Residues 78 % Identity 9% Template c2dl1A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:spartin; PDBTitle: solution structure of the mit domain from human spartin Resolution UNK

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		Q	Q	L	V	T	M	L	F	D	G	V	L	S	A	L	V	R	A	S	L	F	M	Q	D	N	N	Q	Q	G	K	G	V	S	L	S	K	A	I	N	I	I	E	N	G	L	R	V	S	L	D	.	E	E	S	K	D	E	L	T	Q	N	L	I	A	L	Y	S	Y	M	V	R	R	L	L	Q	A	N	L	R
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		I	K	I	I	R	E	A	Y	K	K	A	F	L	F	V	N	K	G	L	N	T	D	E	L	G	Q	K	E	E	A	K	N	Y	Y	K	Q	G	I	G	H	L	L	R	G	I	S	I	S	S	K	E	S	E	H	T	G	P	G	W	E	S	A	R	Q	M	Q	Q	K	M	K	E	T	L	Q	N	V	R	T	R
Template Known Secondary structure																										T																					S	S					T	T				S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions