Job Description P26608 Confidence 5.60% Date Thu Jan 5 11:42:58 GMT 2012 Rank 32 Aligned Residues 52 % Identity 12% Template c1rm1C_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:transcription initiation factor iia large chain; PDBTitle: structure of a yeast tfiia/tbp/tata-box dna complex Resolution 2.50 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	N	L	I	A	L	Y	S	Y	M	V	R	R	L	L	Q	A	N	L	R	N	D	V	S	A	V	E	E	V	E	A	L	M	R	N	I	A	D	A	W	K	E	S	L	L	S	P	S	L	I	Q	D	P
Query Conservation
Alig confidence																						.
Template Conservation																						.
Template Sequence		A	E	A	S	R	V	Y	E	I	I	V	E	S	V	V	N	E	V	R	E	.	D	F	E	N	A	G	I	D	E	Q	T	L	Q	D	L	K	N	I	W	Q	K	K	L	T	E	T	K	V	T	T	F	S
Template Known Secondary structure																						.						T																					T	S	S			T
Template Predicted Secondary structure																						.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions