Return to main results Retrieve Phyre Job Id

Job DescriptionP39901
Confidence7.57%DateThu Jan 5 12:01:08 GMT 2012
Rank66Aligned Residues27
% Identity19%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40.. .......50....
Predicted Secondary structure 


..




Query SS confidence 














. .











Query Sequence  HSNYLRNYMGHLRQK. . LEQDPARPRHFI
Query Conservation     

  

 




..
         
 
Alig confidence 














..











Template Conservation 
  

  

  

 

 
 
     
 
 
Template Sequence  SPNAAEEHLKALARKGVIEIVSGASRGIR
Template Known Secondary structure  STTS
SSSSS
Template Predicted Secondary structure 










Template SS confidence 




























   3940.........50.........60.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions