Job Description P39901 Confidence 20.12% Date Thu Jan 5 12:01:08 GMT 2012 Rank 44 Aligned Residues 59 % Identity 15% Template c3kz4A_ PDB info PDB header:virus Chain: A: PDB Molecule:inner capsid protein vp2; PDBTitle: crystal structure of the rotavirus double layered particle Resolution 3.80 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	C	W	Q	I	V	R	Y	L	C	R	I	R	Q	M	X	G	L	N	A	I	E	H	S	N	Y	L	R	N	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A	R	P	R	H	F	I	T	E	T	G	I	G	Y	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	A	G	K	V	V	D	S	E	T	A	S	I	C	D	A	I	F	Q	D	E	E	T	E	G	A	V	R	R	F	I	A	E	M	R	Q	R	V	Q	A	D	R	N	V	V	N	Y	P	S	I	L	H	P	I	D	Y	A	F
Template Known Secondary structure		S	S					S												T	T	S			S										T							G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions