Job Description P39901 Confidence 7.74% Date Thu Jan 5 12:01:08 GMT 2012 Rank 64 Aligned Residues 48 % Identity 17% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		A	L	S	V	C	W	Q	I	V	R	Y	L	C	R	I	R	Q	M	X	G	L	N	A	I	E	H	S	N	Y	L	R	N	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A	R	P	R	H	F	I	T	E	T	G	I	.	.	G	Y	R	F
Query Conservation																																																											.	.
Alig confidence																				.	.	.	.	.																			.	.	.	.	.	.	.	.									.	.
Template Conservation																				.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Sequence		L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	.	.	.	.	.	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	G	.	.	.	.	.	.	.	.	Y	L	T	G	T	V	G	K	N	G	G	Y	Q	L
Template Known Secondary structure				T	T	T	T	S		B										.	.	.	.	.	T	S		G	G	G	T										T	T	.	.	.	.	.	.	.	.	S	S					S	T	T
Template Predicted Secondary structure																				.	.	.	.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions