Job Description P39901 Confidence 99.61% Date Thu Jan 5 12:01:08 GMT 2012 Rank 11 Aligned Residues 57 % Identity 18% Template c2pmuD_ PDB info PDB header:transcription regulation Chain: D: PDB Molecule:response regulator phop; PDBTitle: crystal structure of the dna-binding domain of phop Resolution 1.78 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	S	V	C	W	Q	I	V	R	Y	L	C	R	I	R	Q	M	X	G	L	N	A	I	E	H	S	N	Y	L	R	N	Y	M	G	H	L	R	Q	K	L	E	Q	D	P	A	R	P	R	H	F	I	T	E	T	G	I	G	Y	R	F
Query Conservation
Alig confidence																								.	.																						.	.
Template Conservation																								.	.																						.	.
Template Sequence		F	V	I	N	A	G	T	V	L	S	K	P	K	I	L	D	H	V	W	R	Y	D	.	.	F	G	V	N	V	V	E	S	Y	V	S	Y	L	R	R	K	I	D	T	G	E	.	.	K	R	L	L	H	T	L	R	G	V	G	Y	V	L
Template Known Secondary structure					T	T	T	S		B										S		T	T	.	.																				S	S	.	.	S							T	T	T
Template Predicted Secondary structure																								.	.																						.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.			.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.			.	.	230	.	.	.	.	.	.	.	.	.	240	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions