Job Description P39901 Confidence 48.06% Date Thu Jan 5 12:01:08 GMT 2012 Rank 27 Aligned Residues 17 % Identity 12% Template c1h0mD_ PDB info PDB header:transcription/dna Chain: D: PDB Molecule:transcriptional activator protein trar; PDBTitle: three-dimensional structure of the quorum sensing protein2 trar bound to its autoinducer and to its target dna Resolution 3.0 Å

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		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	S	N	Y	L	R	N	Y	M	G	H	L	R	Q	K	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Y	N	S	V	R	V	K	L	R	E	A	X	K	R	F	D
Template Known Secondary structure																		T
Template Predicted Secondary structure
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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