 |
Job Description | P0AB10 | Confidence | 2.54% | Date | Thu Jan 5 11:14:18 GMT 2012 |
Rank | 32 | Aligned Residues | 26 |
% Identity | 27% | Template | c3g80B_ |
PDB info |
PDB header:viral protein | Chain: B: PDB Molecule:protein b2; |
PDBTitle: nodamura virus protein b2, rna-binding domain
|
Resolution | 2.50 Å |
|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | E | M | V | K | V | L | A | G | V | W | S | Q | E | A | A | S | I | A | Q | E | I | K | R | L |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|
|
Template Sequence |   |
A | Y | E | L | I | K | S | L | P | A | K | L | E | Q | L | A | Q | E | T | Q | A | T | I | Q | T | L |
Template Known Secondary structure |   |
 |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|