Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF49
Confidence88.41%DateThu Jan 5 11:31:04 GMT 2012
Rank87Aligned Residues38
% Identity29%Templated1vz0a1
SCOP infoDNA/RNA-binding 3-helical bundle KorB DNA-binding domain-like KorB DNA-binding domain-like
Resolution2.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.
Predicted Secondary structure 







Query SS confidence 





































Query Sequence  TTQEKIAIVQQSFEPGMTVSLVARQHGVAASQLFLWRK
Query Conservation 
 


  

      
 

 



  

  
 
  
 
Alig confidence 





































Template Conservation   


 
 
   
   
 
   

  

 
   
   
 
Template Sequence  SPVEEARGYQALLEMGLTQEEVARRVGKARSTVANALR
Template Known Secondary structure 
TT

T

Template Predicted Secondary structure 







Template SS confidence 





































   119120.........130.........140.........150......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions