Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF49
Confidence81.37%DateThu Jan 5 11:31:04 GMT 2012
Rank186Aligned Residues42
% Identity17%Templated1mh3a1
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like Homeodomain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20....... ..30.........40.........
Predicted Secondary structure 






....






Query SS confidence 



















. . . .





















Query Sequence  EKRRRRTTQEKIAIVQQSFE. . . . PGMTVSLVARQHGVAASQLFLW
Query Conservation   


 

 


  

     .... 
 

 



  

  
 
  
Alig confidence 



















....





















Template Conservation 
 

 

  
   

  
     
       

   

   

  
Template Sequence  AAAAAISPQARAFLEQVFRRKQSLNSKEKEEVAKKCGITPLQVRVW
Template Known Secondary structure 

S
SS

S


TS
Template Predicted Secondary structure 














Template SS confidence 













































   472.......480.........490.........500.........510.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions