Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF49
Confidence77.81%DateThu Jan 5 11:31:04 GMT 2012
Rank238Aligned Residues31
% Identity23%Templatec3nxcA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:hth-type protein slma; PDBTitle: molecular mechanism by which the escherichia coli nucleoid occlusion2 factor, slma, keeps cytokinesis in check
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20....... ..30.........40........
Predicted Secondary structure  ..






Query SS confidence 









. .




















Query Sequence  KIAIVQQSFE. . PGMTVSLVARQHGVAASQLFL
Query Conservation 
  

     .. 
 

 



  

  
 
  
Alig confidence 









..




















Template Conservation 
  

 

       
   

  



  


 
Template Sequence  REEILQSLALMLESITTAKLAASVGVSEAALYR
Template Known Secondary structure 


TTS
T
Template Predicted Secondary structure 


Template SS confidence 
































   26...30.........40.........50........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions