Job Description Q6BF16 Confidence 97.67% Date Thu Jan 5 12:37:28 GMT 2012 Rank 187 Aligned Residues 199 % Identity 17% Template d2d69a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.90

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		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	L	I	A	I	L	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K
Query Conservation										.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P
Template Known Secondary structure		S	S								S	S	S	S																	T	T		S						T	T		S		B	T	T	B																					S	S							B			S	S
Template Predicted Secondary structure
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.							.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure								.	.	.	.														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	Q	V	D	A	.	.	.	.	L	A	R	M	G	C	Q	L	I	V	T	P	N	.	.	.	.	.	.	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L
Query Conservation								.	.	.	.														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.														.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I
Template Known Secondary structure																T																											T								T	T	T					S		T	T	S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
					126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.	.																						.	.	.	.	.	.																						.											.
Query SS confidence		.	.	.																						.	.	.	.	.	.																						.											.
Query Sequence		.	.	.	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	.	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	.	A	G	C	A	G	A	G	L	G	S	.	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A
Query Conservation		.	.	.																						.	.	.	.	.	.																						.											.
Alig confidence		.	.	.																						.	.	.	.	.	.																						.											.
Template Conservation
Template Sequence		H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R	I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G	A	K	A	L	R
Template Known Secondary structure								S	S	S																S			T	T										S	S			G	G	G										S												T		T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		195	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	I	D	A	A	I	E	G	V
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		391	.	.	.	.	.	.	.	.	400

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions