Job Description Q6BF16 Confidence 96.54% Date Thu Jan 5 12:37:28 GMT 2012 Rank 247 Aligned Residues 199 % Identity 14% Template d1ykwa1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.00

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		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	L	I	A	I	L	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K
Query Conservation										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	P	I	F	F	G	V	V	K	P	N	I	G	L	S	P	G	E	F	A	E	I	A	Y	Q	S	W	L	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	T	W	S	S	I	E	E	R	A	A	H	L	G	K	A	R	R	K	A	E	A	E	T	G	E	P	K	I	Y	L	A	N	I	T	D	E
Template Known Secondary structure		S	S								S	S		S	S																T	T		S						T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	.	.	.	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	.
Query Conservation		.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence		.	.	.	.																						.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		V	D	S	L	M	E	K	H	D	V	A	V	R	N	G	A	N	A	L	L	I	N	A	L	P	V	G	L	S	A	V	R	M	L	S	N	Y	T	Q	V	P	L	I	G	H	F	P	F	I	A	S	F	S	R	M	E	K	Y	G	I	H	S	K	V	M	T	K	L	Q	R	L	A	G	L	D	A	V	I	M	P
Template Known Secondary structure		G	G	G												T																								S	S							T	T	T						S	T	T	S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
				128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.							.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.																				.	.	.	.	.	.																							.		.	.
Query SS confidence		.	.																				.	.	.	.	.	.																							.		.	.
Query Sequence		.	.	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	.	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	.	G	.	.	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F
Query Conservation		.	.																				.	.	.	.	.	.																							.		.	.
Alig confidence		.	.																				.	.	.	.	.	.																							.		.	.
Template Conservation
Template Sequence		G	F	G	D	R	V	M	T	P	E	E	E	V	L	E	N	V	I	E	C	T	K	P	M	G	R	I	K	P	C	L	P	V	P	G	G	S	D	S	A	L	T	L	Q	T	V	Y	E	K	V	G	N	V	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	K	A	G	A	K	S	I	R	Q	A
Template Known Secondary structure			S	S	T	T	S	S	S														S			T	T											S	B		T	T	T										S	S		S				B	S	S	S	S	S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		197	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	A	I	E	Q	G	I
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		403	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions