Job Description Q6BF16 Confidence 99.17% Date Thu Jan 5 12:37:28 GMT 2012 Rank 106 Aligned Residues 188 % Identity 19% Template d1ujpa_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 1.34

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		4	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.
Predicted Secondary structure												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	T	K	L	P	L	I	A	I	L	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L
Query Conservation												.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.																	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		E	G	R	A	A	L	I	P	Y	L	T	A	G	F	P	S	R	E	G	F	L	Q	A	V	E	E	V	L	.	P	Y	A	D	L	L	E	I	G	L	P	Y	S	D	G	P	V	I	Q	R	A	S	E	L	A	L	R	K	G	M	S	V	Q	G	A	L	E	L	V	R	E	V	R	A	L	T	E	K	P	L	F
Template Known Secondary structure		T	T	B									T	T	S	S													G	.	G	G		S	S																							T	T																			S
Template Predicted Secondary structure																														.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		62	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.																											.	.	.	.																			.	.	.
Query SS confidence						.	.	.	.	.																											.	.	.	.																			.	.	.
Query Sequence		I	G	A	G	.	.	.	.	.	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	S	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	.	.	.	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P
Query Conservation						.	.	.	.	.																											.	.	.	.																			.	.	.
Alig confidence						.	.	.	.	.																											.	.	.	.																			.	.	.
Template Conservation
Template Sequence		L	M	T	Y	L	N	P	V	L	A	W	G	P	E	R	F	F	G	L	F	K	Q	A	G	A	T	G	V	I	L	P	D	L	P	P	D	E	D	P	G	L	V	R	L	A	Q	E	I	G	L	E	T	V	F	L	L	A	P	T	S	T	D	A	R	I	A	T	V	V	R	H	A	T	G	F	V	Y	A	V	S
Template Known Secondary structure																									T							T	T			G	G	G												T									T	T											T	T			S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																									.	.	.
Query SS confidence																														.																									.	.	.
Query Sequence		S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	.	.	.	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K
Query Conservation																														.																									.	.	.
Alig confidence				.	.													.	.											.									.	.															.	.	.
Template Conservation				.	.													.	.																				.	.
Template Sequence		V	E	.	.	V	K	D	L	V	R	R	I	K	A	R	T	.	.	A	L	P	V	A	V	G	F	G	V	S	G	K	A	T	A	A	Q	A	.	.	A	V	A	D	G	V	V	V	G	S	A	L	V	R	A	L	E	E	G	R	S	L	A	P	L	L	Q	E	I	R	Q	G	L	Q
Template Known Secondary structure				.	.										T	T		.	.		S						S				S								.	.	T	T	S	S														T	T															B
Template Predicted Secondary structure				.	.													.	.																				.	.
Template SS confidence
		176	.			.	.	180	.	.	.	.	.	.	.	.	.			190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions