Job Description Q6BF16 Confidence 99.83% Date Thu Jan 5 12:37:28 GMT 2012 Rank 25 Aligned Residues 202 % Identity 14% Template d1rd5a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.02

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.																							.	.	.	50	.	.	.	.
Predicted Secondary structure															.				.																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.				.																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	Q	W	Q	T	K	L	P	L	I	A	I	L	.	R	G	I	.	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	.	.	L	N	S	P	Q	W	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	S	I	P	A	I	V	D
Query Conservation															.				.																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.				.																								.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	M	A	K	G	K	T	A	F	I	P	Y	I	T	A	G	D	P	D	L	A	T	T	A	E	A	L	R	L	L	D	G	C	G	A	D	V	I	E	L	G	V	P	C	S	D	P	Y	I	D	G	P	I	I	Q	A	S	V	A	R	A	L	A	S	G	T	T	M	D	A	V	L	E	M	L	R	E	V	T	P
Template Known Secondary structure					T	T										T	T	S	S															T	T		S	S								S			T	T	S													T	T	T														G	G
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																	.																							.	.	.	.																				.	.	.
Query SS confidence																	.																							.	.	.	.																				.	.	.
Query Sequence		A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	.	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	S	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K
Query Conservation																	.																							.	.	.	.																				.	.	.
Alig confidence																	.																							.	.	.	.																				.	.	.
Template Conservation
Template Sequence		E	L	S	C	P	V	V	L	L	S	Y	Y	K	P	I	M	F	R	S	L	A	K	M	K	E	A	G	V	H	G	L	I	V	P	D	L	P	Y	V	A	A	H	S	L	W	S	E	A	K	N	N	N	L	E	L	V	L	L	T	T	P	A	I	P	E	D	R	M	K	E	I	T	K	A	S	E	G	F	V	Y
Template Known Secondary structure		G		S	S								S					S			T						T	T							T	T			T	T	T											T	T									T	T	S														S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		127	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.				.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																							.																									.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																							.																									.	.	.
Query Sequence		I	F	P	S	S	A	F	G	P	.	.	.	.	.	.	.	.	.	.	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	.	.	.	A	G	Q	S	V	E	R	T	A	Q	Q
Query Conservation											.	.	.	.	.	.	.	.	.	.																							.																									.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.											.	.											.																									.	.	.
Template Conservation																															.	.
Template Sequence		L	V	S	V	N	G	V	T	G	P	R	A	N	V	N	P	R	V	E	S	L	I	Q	E	V	K	K	V	T	.	.	N	K	P	V	A	V	G	F	G	I	S	K	P	E	H	V	K	Q	I	A	Q	W	G	A	D	G	V	I	I	G	S	A	M	V	R	Q	L	G	E	A	A	S	P	K	Q	G	L	R	R
Template Known Secondary structure					S	S			B		T	T	S		B		T														.	.	S	S						S				S										T	T		S														S	S	S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200			.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	E	E	Y	A	R	G	M	K	N	A	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions