Job Description Q6BF16 Confidence 99.88% Date Thu Jan 5 12:37:28 GMT 2012 Rank 16 Aligned Residues 186 % Identity 13% Template d1piia2 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.									20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	.	.	.	.	.	.	.	.	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	E	.	.	.	.	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q
Query Conservation																	.	.	.	.	.	.	.	.																												.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.										.										.								.	.	.	.												.
Template Conservation																																		.										.																							.
Template Sequence		A	R	T	A	F	I	L	E	C	K	K	A	S	P	S	K	G	V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	.	K	H	Y	A	S	A	I	S	V	.	L	T	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	P	.	Q	P	I	L	C	K	D	F	I	I	D	P	Y	Q
Template Known Secondary structure		S	S									S			T	T	T			S		S	S											.	T	T	T		S					.				S	T	T	T				T	T											.	S						S				S
Template Predicted Secondary structure																																		.										.																							.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.
		73	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure														.	.								.	.	.	.																																							.	.	.	.
Query SS confidence														.	.								.	.	.	.																																							.	.	.	.
Query Sequence		V	D	A	L	A	R	M	G	C	Q	L	I	.	.	V	T	P	N	I	H	S	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	.	.	.	.	S	S	A	F	G	P	Q	Y	I	K	A	L	K
Query Conservation														.	.								.	.	.	.																																							.	.	.	.
Alig confidence														.	.								.	.	.	.																																							.	.	.	.
Template Conservation
Template Sequence		I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	E	E	Q	E	R	A	I	A	L	G	A	K	V	V	G	I	N	N	R	D	L	R	D	L	S	I	D	L	N	R	T	R	E	L	A
Template Known Secondary structure								T	T		S						T	T	T																T	T									S										T	T		S						S			T	T	T	T				T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	K	L	G	H	N	V	T	V	I	S	E	S	G	I	N	T	Y	A	Q	V	R	E	L	S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	A	A	V	R	R	V	L
Template Known Secondary structure						T	T	S						S												T	T	T		S										T		S
Template Predicted Secondary structure
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions