Job Description Q6BF16 Confidence 98.97% Date Thu Jan 5 12:37:28 GMT 2012 Rank 126 Aligned Residues 175 % Identity 18% Template d1jvna1 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes Resolution 2.10

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																						.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	.	.	.	.	.	.	.	.	.	.	Q	V	D	A	L	A	R	M	G	C	Q
Query Conservation																						.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	P	V	Q	L	A	Q	K	Y	Y	Q	Q	G	A	D	E	V	T	F	L	N	I	T	D	C	P	L	K	D	T	P	M	L	E	V	L	K	Q	A	A	K	T	V	F	V	P	L	T	V	G	G	G	I	K	D	I	V	D	V	D	G	T	K	I	P	A	L	E	V	A	S	L	Y	F	R	S	G	A	D
Template Known Secondary structure														T	T		S												G	G	G											T	T	T			S						S	S		S					T	T																	T		S
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.																					.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	I	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	V	C	P	G	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	S	I	G	T	D	A	V	Y	A	A	E	K	Y	Y	E	L	G	N	R	G	D	G	T	S	P	I	E	T	I	S	K	A	Y	G	A	Q	A	V	V	I	S	V	D	P	K	R	V	Y	V	N	S	Q	A	D	T	K	N	K	V	F	E	T	E	Y	P	G	P	N	G	E	K	Y	C	W	Y	Q	C	T
Template Known Secondary structure																			T	T	S				S		S											G	G	G													S	S	G	G	G		S	S						S	S			T	T
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
												109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130							.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.		.	.	.	.	.	170
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																												.								.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																												.								.
Query Sequence		.	.	.	.	.	.	.	.	.	.	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	.	.	.	.	.	.	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	.	W	I	D	A	G	C
Query Conservation		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																												.								.
Alig confidence		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																.	.											.								.
Template Conservation																																																							.	.
Template Sequence		I	K	G	G	R	E	S	R	D	L	G	V	W	E	L	T	R	A	C	E	A	L	G	A	G	E	I	L	L	N	C	I	D	K	D	G	S	N	S	G	Y	D	L	E	L	I	E	H	V	K	D	A	V	.	.	K	I	P	V	I	A	S	S	G	A	G	V	P	E	H	F	E	E	A	F	L	K	T	R	A
Template Known Secondary structure			T	T	T	T																	T	T									G	G	G	T	T	T		S															.	.	S	S						S				S											S
Template Predicted Secondary structure																																																							.	.
Template SS confidence
		440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	C	L	G	A	G	M	F	H	R	G	E	F	T	V	N	D	V	K	E	Y	L	L	E
Template Known Secondary structure		S					S					T	T	S
Template Predicted Secondary structure
Template SS confidence
		518	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions