Job Description Q6BF16 Confidence 97.27% Date Thu Jan 5 12:37:28 GMT 2012 Rank 214 Aligned Residues 199 % Identity 16% Template d1bxna1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 2.70

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		6	.	.	.	10	.	.	.					.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.		.
Predicted Secondary structure										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query SS confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Query Sequence		K	L	P	L	I	A	I	L	.	.	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	.	L
Query Conservation										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Alig confidence										.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.																							.
Template Conservation
Template Sequence		G	R	P	L	L	G	A	T	T	K	P	K	L	G	L	S	G	R	N	Y	G	R	V	V	Y	E	G	L	K	G	G	L	D	F	M	K	D	D	E	N	I	N	S	Q	P	F	M	H	W	R	D	R	F	L	F	V	M	D	A	V	N	K	A	S	A	A	T	G	E	V	K	G	S	Y	L	N	V	T	A	G
Template Known Secondary structure		S	S								T	T		T	T																T	T		S						T	T		S	S		T	T	S																					T	S											S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		69	70	.	.	.	.	.					.	.	.	.	80	.	.	.	.	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure									.	.	.	.														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	E	Q	V	D	A	.	.	.	.	L	A	R	M	G	C	Q	L	I	V	T	P	N	.	.	.	.	.	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L
Query Conservation									.	.	.	.														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	M	E	E	M	Y	R	R	A	E	F	A	K	S	L	G	S	V	I	I	M	V	D	L	I	V	G	W	T	C	I	Q	S	M	S	N	W	C	R	Q	N	D	M	I	L	H	L	H	R	A	G	H	G	T	Y	T	R	Q	K	N	H	G	V	S	F	R	V	I	A	K	W	L	R	L	A	G	V	D	H	M
Template Known Secondary structure		S														T	T		S						G	G	G														T	T	T								T	T	T					S		T	T	S	S														T		S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.																						.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.		.	.
Predicted Secondary structure									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Query SS confidence									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Query Sequence		K	I	F	P	S	S	A	.	.	.	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	.	A	G	C	A	G	A	G	L	G	S	.	D	L
Query Conservation									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Alig confidence									.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.											.
Template Conservation
Template Sequence		H	T	G	T	A	V	G	K	L	E	G	D	P	L	T	V	Q	G	Y	Y	N	V	C	R	D	A	Y	T	Q	T	D	L	T	R	G	L	F	F	D	Q	D	W	A	S	L	R	K	V	M	P	V	A	S	G	G	I	H	A	G	Q	M	H	Q	L	I	H	L	F	G	D	D	V	V	L	Q	F	G	G	G	T
Template Known Secondary structure						T	T	S	S	T	T																S					B	G	G	G	T	B		S					T	T											S			G	G	G										S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	H	P	Q	G	I	Q	A	G	A	T	A	N	R	V	A	L	E	A	M	V	L	A	R
Template Known Secondary structure			T		T	T
Template Predicted Secondary structure
Template SS confidence
		409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions