Job Description Q6BF16 Confidence 99.89% Date Thu Jan 5 12:37:28 GMT 2012 Rank 14 Aligned Residues 183 % Identity 17% Template d1a53a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20							.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																			.	.	.
Query SS confidence																		.	.	.	.	.	.																			.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	.	.	.	.	.	.	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A
Query Conservation																		.	.	.	.	.	.																			.	.	.
Alig confidence																		.	.	.	.	.	.						.													.	.	.																							.
Template Conservation																													.																																						.
Template Sequence		N	I	T	A	I	I	A	E	Y	K	R	K	S	P	S	G	L	D	V	E	R	D	P	I	E	Y	S	.	K	F	M	E	R	Y	A	V	G	L	S	I	L	T	E	E	K	Y	F	N	G	S	Y	E	T	L	R	K	I	A	S	S	V	S	I	P	I	.	L	M	K	D	F	I	V	K	E	S	Q	I	D	D
Template Known Secondary structure		T										S	B		T	T	S		B										.				T	T	T		S									T	T	T																S			.				S				S
Template Predicted Secondary structure																													.																																						.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.
		76	.	.	.	80	.	.	.	.	.							.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.																																														.	.	.	.
Query SS confidence												.	.	.	.	.	.																																														.	.	.	.
Query Sequence		L	A	R	M	G	C	Q	L	I	V	.	.	.	.	.	.	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	.	.	.	.	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L
Query Conservation												.	.	.	.	.	.																																														.	.	.	.
Alig confidence												.	.	.	.	.	.																																														.	.	.	.
Template Conservation
Template Sequence		A	Y	N	L	G	A	D	T	V	L	L	I	V	K	I	L	T	E	R	E	L	E	S	L	L	E	Y	A	R	S	Y	G	M	E	P	L	I	E	I	N	D	E	N	D	L	D	I	A	L	R	I	G	A	R	F	I	G	I	N	S	R	D	L	E	T	L	E	I	N	K	E	N	Q	R	K	L	I	S	M	I
Template Known Secondary structure						T		S						G	G	G	S														T	T	T									S										T	T		S						S	B		T	T	T			B												S
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		146	.	.	.	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		P	S	D	I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T
Query Conservation														.
Alig confidence														.
Template Conservation
Template Sequence		P	S	N	V	V	K	V	A	E	S	G	I	S	E	R	N	E	I	E	E	L	R	K	L	G	V	N	A	F	L	I	G	S	S	L	M	R	N	P	E	K	I	K	E	F
Template Known Secondary structure			T	T	S						S														T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions