Job Description Q6BF16 Confidence 99.45% Date Thu Jan 5 12:37:28 GMT 2012 Rank 68 Aligned Residues 195 % Identity 12% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		2	.	.	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																						.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	W	Q	T	K	L	P	L	I	A	I	L	.	.	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D
Query Conservation														.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	Y	K	E	N	A	N	V	A	Y	T	V	L	G	Y	P	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K
Template Known Secondary structure		G	S		S	S	S								T	T	S	S											T	G	G	G	S	S		S								S	S					S	S													T	T												T				S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		59	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.					.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																						.	.	.	.																			.	.	.
Query SS confidence														.	.	.	.	.	.																						.	.	.	.																			.	.	.
Query Sequence		K	A	L	I	G	A	G	T	V	L	K	P	.	.	.	.	.	.	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	S	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	.	.	.	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L
Query Conservation														.	.	.	.	.	.																						.	.	.	.																			.	.	.
Alig confidence														.	.	.	.	.	.																						.	.	.	.																			.	.	.
Template Conservation
Template Sequence		K	A	L	V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I
Template Known Secondary structure		S																										T	T							T	T			G	G	G												T									T	T	S										T	T			S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		126	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.																																																.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.																																																.	.
Query Sequence		K	I	F	P	S	S	A	F	G	.	.	.	.	.	.	.	.	.	.	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	.	.	A	G	Q	S	V	E	R	T	A	Q	Q	A
Query Conservation											.	.	.	.	.	.	.	.	.	.																																																.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.												.	.																																			.	.
Template Conservation																																.	.
Template Sequence		Y	L	L	A	S	I	G	I	T	G	T	K	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	.	.	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I
Template Known Secondary structure							S		S	S																			T	T		.	.		S						S	S			S	S							T	T	T	S	S												T	T	S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		194	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	F	V	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	I	F	K
Template Known Secondary structure				T	T
Template Predicted Secondary structure
Template SS confidence
		244	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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