Job Description Q6BF16 Confidence 85.73% Date Thu Jan 5 12:37:28 GMT 2012 Rank 489 Aligned Residues 180 % Identity 13% Template c3t4cD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase 1; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate aldolase from2 burkholderia ambifaria Resolution 1.95 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																							.	.	.																																																				.	.	.
Query SS confidence																							.	.	.																																																				.	.	.
Query Sequence		I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	.	.	.	E	I	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	.	.	.	N	I
Query Conservation																							.	.	.																																																				.	.	.
Alig confidence																							.	.	.																											.	.	.															.								.	.	.
Template Conservation																																																				.	.	.															.
Template Sequence		E	S	E	Q	M	T	I	D	T	A	G	R	L	K	E	I	C	A	K	L	N	V	P	F	I	Y	K	S	S	M	D	E	G	L	R	I	L	G	E	V	K	R	Q	L	G	L	P	V	L	T	.	.	.	D	V	H	S	I	D	E	I	E	Q	V	A	S	V	.	V	D	V	L	Q	T	P	A	F	L	C	R
Template Known Secondary structure																					T	T																								T						.	.	.				S									T	T	.		S						G	G	G	T	T
Template Predicted Secondary structure																																																				.	.	.															.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110														.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Query Sequence		H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	.	.	.	.	.	.	.	.	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.																	.	.	.
Template Conservation																																																																													.	.	.
Template Sequence		Q	T	D	F	I	H	A	C	A	R	S	G	K	P	V	N	I	K	K	G	Q	F	L	A	P	H	D	M	K	N	V	I	D	K	A	R	E	A	A	R	E	A	G	L	S	E	D	R	F	M	A	C	E	R	G	V	S	F	G	Y	N	N	L	V	S	D	M	R	S	L	A	I	M	R	E	.	.	.	T	S
Template Known Secondary structure											T	T	S	S								T	T	S		G	G	G															T	T			S													S	S	S												G	G	G	.	.	.	G	S
Template Predicted Secondary structure																																																																													.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190				.	.
		149	150	.	.	.								.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure							.	.	.	.	.	.	.						.	.	.																															.	.	.	.
Query SS confidence							.	.	.	.	.	.	.						.	.	.																															.	.	.	.
Query Sequence		I	A	V	F	A	.	.	.	.	.	.	.	V	G	G	V	T	.	.	.	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	.	.	.	.	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E
Query Conservation							.	.	.	.	.	.	.						.	.	.																															.	.	.	.
Alig confidence							.	.	.	.	.	.	.						.	.	.																															.	.	.	.
Template Conservation
Template Sequence		A	P	V	V	F	D	A	T	H	S	V	Q	L	P	G	Q	R	E	F	V	P	V	L	A	R	A	A	V	A	T	G	V	A	G	L	F	M	E	T	H	P	N	P	A	E	A	K	S	D	G	P	N	A	V	P	L	N	R	M	G	A	L	L	E	T	L	V	T
Template Known Secondary structure		S										T						T	T															S								S		T	T	T			T	T	S		S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions