Job Description Q6BF16 Confidence 95.93% Date Thu Jan 5 12:37:28 GMT 2012 Rank 261 Aligned Residues 184 % Identity 15% Template c3stgA_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of a58p, del(n59), and loop 7 truncated mutant of 3-2 deoxy-d-manno-octulosonate 8-phosphate synthase (kdo8ps) from3 neisseria meningitidis Resolution 2.20 Å

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		10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure										.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	I	L	R	G	I	T	.	.	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V
Query Conservation										.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Template Conservation																																																																							.	.	.
Template Sequence		I	N	V	L	E	S	L	D	S	T	L	Q	T	C	A	H	Y	V	E	V	T	R	K	L	G	I	P	Y	I	F	K	A	S	F	D	K	P	R	S	S	I	H	S	Y	R	G	V	G	L	E	E	G	L	K	I	F	E	K	V	K	A	E	F	G	I	P	V	I	T	.	.	.	D	V	H	E	P	H	Q	C
Template Known Secondary structure																										T									S			T	T	S		T	T	S				S																							.	.	.				S
Template Predicted Secondary structure																																																																							.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.				.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.		110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.
Predicted Secondary structure																.	.	.																				.	.				.											.	.	.	.									.	.	.	.	.	.	.	.
Query SS confidence																.	.	.																				.	.				.											.	.	.	.									.	.	.	.	.	.	.	.
Query Sequence		D	A	L	A	R	M	G	C	Q	L	I	V	T	P	.	.	.	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	G	C	A	.	T	A	T	E	A	F	T	A	L	E	.	.	.	.	A	G	A	Q	A	L	K	I	.	.	.	.	.	.	.	.	F	P	S	S	A	F	G	P
Query Conservation																.	.	.																				.	.				.											.	.	.	.									.	.	.	.	.	.	.	.
Alig confidence								.								.	.	.																				.	.				.											.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation								.
Template Sequence		Q	P	V	A	E	V	.	C	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	V	A	M	A	K	T	G	N	V	V	N	I	K	K	P	Q	F	L	S	P	S	Q	M	K	N	I	V	E	K	F	H	E	A	G	N	G	K	L	I	L	C	E	R	G	S	S	F	G	Y	D	N	L	V	V	D	M
Template Known Secondary structure								.		S						G	G	G	T	T																					T	T	S		G	G	G											T	T														S	S	S						T
Template Predicted Secondary structure								.
Template SS confidence
		99	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.								.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.
Query Sequence		Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	.	.	.	.	.	.	.	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E
Query Conservation																												.	.	.	.	.	.	.
Alig confidence												.																.	.	.	.	.	.	.																		.	.	.	.
Template Conservation												.																																								.	.	.	.
Template Sequence		L	G	F	G	V	M	K	Q	T	C	.	G	N	L	P	V	I	F	D	V	T	H	S	L	G	R	R	A	Q	A	L	D	L	A	L	A	G	M	A	T	R	L	A	G	L	F	L	E	S	H	.	.	.	.	P	D	P	S	A	L	P	L	H	L	L	E	D	F	L	I	R	I	K	A
Template Known Secondary structure											T	.	T	T							T	T	T	T		S	S	G	G	G										T	T			S								.	.	.	.					S			G	G	G
Template Predicted Secondary structure												.																																								.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.					.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions