Job Description Q6BF16 Confidence 93.23% Date Thu Jan 5 12:37:28 GMT 2012 Rank 383 Aligned Residues 167 % Identity 13% Template c3ritE_ PDB info PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from methylococcus capsulatus2 complexed with mg and dipeptide l-arg-d-lys Resolution 2.70 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.			.	.	.	70	.	.	.					.	.	.
Predicted Secondary structure																																						.	.																											.	.								.	.	.	.
Query SS confidence																																						.	.																											.	.								.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	.	.	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	.	.	V	L	K	P	E	Q	V	.	.	.	.	D	A	L
Query Conservation																																						.	.																											.	.								.	.	.	.
Alig confidence																																						.	.																											.	.								.	.	.	.
Template Conservation
Template Sequence		D	S	L	P	T	S	V	T	I	G	I	K	P	V	E	E	T	L	A	E	A	R	E	H	L	A	L	G	F	R	V	L	K	V	K	L	C	G	D	E	E	Q	D	F	E	R	L	R	R	L	H	E	T	L	A	G	R	A	V	V	R	V	D	P	N	Q	S	Y	D	R	D	G	L	L	R	L	D	R	L	V
Template Known Secondary structure		S				B						S																T	T										S																S	S	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.		.	.	.	120	.		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.
Predicted Secondary structure															.	.	.																			.	.										.						.																											.
Query SS confidence															.	.	.																			.	.										.						.																											.
Query Sequence		A	R	M	G	C	Q	L	I	V	T	P	N	I	.	.	.	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	.	.	C	A	T	A	T	E	A	F	T	.	A	L	E	A	G	.	A	Q	A	L	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	.	D
Query Conservation															.	.	.																			.	.										.						.																											.
Alig confidence															.	.	.																			.	.										.						.																											.
Template Conservation
Template Sequence		Q	E	L	G	I	E	F	I	E	Q	P	F	P	A	G	R	T	D	W	L	R	A	L	P	K	A	I	R	R	R	I	A	A	D	E	S	L	L	G	P	A	D	A	F	A	L	A	A	P	P	A	A	C	G	I	F	N	I	K	L	M	K	C	G	G	L	A	P	A	R	R	I	A	T	I	A	E	T	A	G
Template Known Secondary structure					T								S		T	T							T	S							T				S	T	T			S									S	S	S		S		S										T	S															T
Template Predicted Secondary structure
Template SS confidence
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.		.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		I	A	V	F	A	V	G	G	V	.	T	P	E	N	L	A	Q	W	I	D	A	G	C	A
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		I	D	L	M	W	G	C	M	D	E	S	R	I	S	I	A	A	A	L	H	A	A	L	A
Template Known Secondary structure										S															T
Template Predicted Secondary structure
Template SS confidence
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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