Job Description Q6BF16 Confidence 89.41% Date Thu Jan 5 12:37:28 GMT 2012 Rank 458 Aligned Residues 187 % Identity 14% Template c3lotC_ PDB info PDB header:structure genomics, unknown function Chain: C: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of protein of unknown function (np_070038.1) from2 archaeoglobus fulgidus at 1.89 a resolution Resolution 1.89 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.						.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	.	.	.	.	.	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M
Query Conservation																										.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		P	V	T	P	D	Q	I	V	E	E	A	V	K	A	A	E	A	G	A	G	X	V	H	I	H	A	R	D	P	K	D	G	R	P	T	T	D	V	E	V	F	R	Y	I	C	R	E	I	K	K	Q	S	D	V	V	I	N	V	T	T	G	G	G	G	T	L	G	I	P	V	E	E	R	A	K	V	V	P	A	L
Template Known Secondary structure				S														T	T		S									T	T	T																													S	S	T	T	G	G	G	T							T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		80	.	.																																								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	C	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	P	E	I	A	T	F	N	X	G	S	X	N	F	A	I	H	P	L	L	K	K	Y	K	E	F	K	Y	D	W	E	P	E	Y	L	E	X	T	R	D	I	V	F	R	N	T	F	K	D	L	E	A	L	S	R	I	F	K	E	N	D	T	K	P	E	L	E	C	Y	D	I	G	Q	I	Y	N	T	A	F	X
Template Known Secondary structure				S														G	G	G	G	G	T					S	S	T									G	G	G																				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		121	.	.												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																																		.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																																		.	.	.
Query Sequence		G	A	Q	.	.	.	.	.	.	.	.	.	.	.	A	L	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	.	.	.	.	.	.	.	P	S	D	I	A	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	.	.	.	L
Query Conservation					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																																		.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.																											.							.	.	.
Template Conservation																																																																							.
Template Sequence		F	H	E	G	Y	L	E	P	P	L	R	L	Q	F	I	H	G	I	L	G	G	I	G	T	A	V	E	D	V	L	F	X	K	Q	T	A	D	R	L	I	G	R	E	N	Y	T	W	S	L	V	G	A	G	R	F	Q	X	P	L	G	T	L	A	V	I	X	G	G	D	.	V	R	V	G	L	E	D	S	L	Y
Template Known Secondary structure				T	T	S	S		S	S										T	T	S																			T		G	G	G									G	G	G												T			.				S	T	T	T		S
Template Predicted Secondary structure																																																																							.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	R	G	K	L	A	K	S	N	A	E	Q	V	E	K	X	V	R	I	V	K	E
Template Known Secondary structure				T	T				S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions