Job Description Q6BF16 Confidence 98.82% Date Thu Jan 5 12:37:28 GMT 2012 Rank 140 Aligned Residues 184 % Identity 15% Template c3ldvB_ PDB info PDB header:lyase Chain: B: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.77 angstrom resolution crystal structure of orotidine 5'-2 phosphate decarboxylase from vibrio cholerae o1 biovar3 eltor str. n16961 Resolution 1.77 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.						70	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.																													.	.	.	.	.
Query SS confidence																																							.	.																													.	.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	.	.	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	.	.	.	.	.	P	E	Q	V	D	A	L	A
Query Conservation																																							.	.																													.	.	.	.	.
Alig confidence																													.										.	.															.	.													.	.	.	.	.
Template Conservation																													.																										.	.
Template Sequence		N	D	P	K	V	I	V	A	L	D	Y	D	N	L	A	D	A	L	A	F	V	D	K	I	D	P	S	.	T	C	R	L	K	V	G	K	E	M	F	T	L	F	G	P	D	F	V	R	E	L	H	K	R	.	.	G	F	S	V	F	L	D	L	K	F	H	D	I	P	N	T	C	S	K	A	V	K	A	A	A
Template Known Secondary structure													S										T	T	S		T	T	.	S																								T	.	.	T											S
Template Predicted Secondary structure																													.																										.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.																		.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	M	G	C	Q	L	I	V	T	P	N	I	.	.	.	.	.	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	.	.	.	.	.	.	.	A	T	A	T	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	T	A	L	E	A	G	A	Q	A	L	K	I	F
Query Conservation														.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.																				.	.	.	.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	G	V	W	M	V	N	V	H	A	S	G	G	E	R	M	M	A	A	S	R	E	I	L	E	P	Y	G	K	E	R	P	L	L	I	G	V	T	V	L	T	S	M	E	S	A	D	L	Q	G	I	G	I	L	S	A	P	Q	D	H	V	L	R	L	A	T	L	T	K	N	A	G	L	D	G	V	V	C	S
Template Known Secondary structure				T		S						G	G	G													G	G	G	G	G	G	S								S		T	T									T	T			S																T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.
Query SS confidence																													.	.	.	.
Query Sequence		P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	.	.	.	.	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V
Query Conservation																													.	.	.	.
Alig confidence					.	.	.	.	.	.																			.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		A	Q	E	.	.	.	.	.	.	A	S	L	L	K	Q	H	L	G	R	E	F	K	L	V	T	P	G	I	R	P	A	Q	R	R	I	M	T	P	A	Q	A	I	A	S	G	S	D	Y	L	V	I	G	R	P	I	T	Q	A	A	H	P	E	V	V	L	E	E	I	N	S	S	L	V
Template Known Secondary structure		T	T	T	.	.	.	.	.	.										T	T	S												T	T	S										T		S										T		S	S												T
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		159	160	.							.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions