Job Description Q6BF16 Confidence 97.15% Date Thu Jan 5 12:37:28 GMT 2012 Rank 225 Aligned Residues 147 % Identity 21% Template c3l2iB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: 1.85 angstrom crystal structure of the 3-dehydroquinate dehydratase2 (arod) from salmonella typhimurium lt2. Resolution 1.85 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40								.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.											.
Query SS confidence																																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.											.
Query Sequence		L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	.	.	.	.	.	.	.	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	.	.	.	.	.	.	.	.	G	A	G	T	V	L	K	P	E	Q	.
Query Conservation																																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.											.
Alig confidence																																		.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		I	I	V	S	L	M	G	K	T	I	T	D	V	K	S	E	A	L	A	Y	R	E	A	D	F	D	I	L	E	W	R	V	D	H	F	A	N	V	T	T	A	E	S	V	L	E	A	A	G	A	I	R	E	I	I	T	D	K	P	L	L	F	T	F	R	S	A	K	E	G	G	E	Q	A	L	T	T	G	Q	Y
Template Known Secondary structure									S	S												T	T	S			S						G	G	G		T	T	T	T																		S	S									G	G	G	T		S	S
Template Predicted Secondary structure
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					73	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90						.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure		.	.	.									.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.									.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	V	D	A	L	A	R	M	G	.	C	Q	L	I	V	T	P	N	I	H	.	.	.	.	.	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	.	.	.	.	.	.	.	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F
Query Conservation		.	.	.									.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.									.											.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	L	N	R	A	A	V	D	S	G	L	V	D	M	I	D	L	E	L	F	T	G	D	D	E	V	K	A	T	V	G	Y	A	H	Q	H	N	V	A	V	I	M	S	N	H	D	F	H	K	T	P	A	A	E	E	I	V	Q	R	L	R	K	M	Q	E	L	G	A	D	I	P	K	I	A	V	M	P	Q	T
Template Known Secondary structure												S			S						G	G	G															T	T										S	S																		T	T		S									S	S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.						.	.	.	150	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.
Query SS confidence															.	.	.	.	.
Query Sequence		G	P	Q	Y	I	K	A	L	K	A	V	L	P	.	.	.	.	.	S	D	I	A	V	F	A	V	G
Query Conservation															.	.	.	.	.
Alig confidence															.	.	.	.	.
Template Conservation
Template Sequence		K	A	D	V	L	T	L	L	T	A	T	V	E	M	Q	E	R	Y	A	D	R	P	I	I	T	M	S
Template Known Secondary structure																			T		S	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions