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Job DescriptionQ6BF16
Confidence98.33%DateThu Jan 5 12:37:28 GMT 2012
Rank173Aligned Residues142
% Identity21%Templatec3k30B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   18.20.........30........ .40..... ....50.........60.........
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Query Sequence  PDEALAHVGAVIDAGFDAVEI. . . . . . . . . . . . . . . . . PLNSPQW. . . . . . . . . . . EQSIPAIVDAYGDKALIGAGTVLK
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Template Sequence  RRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGRAAV. . . . . . .
Template Known Secondary structure  T
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   155....160.........170.........180.........190.........200.........210.........220.......
 
   70.........80.........90.........100.........110.........120.........130. .....
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Query Sequence  PEQVDALARMGCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSS. . . . . . . . . . . . . AFGPQ
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Template Sequence  . . . . . . ACRITVEEEIDGGITREDIEGV. . . . . . . . . . . . . . . . . LRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEE
Template Known Secondary structure  ......S


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   228.230.........240......... 250.........260.........270.........280....
 
   137..140.........150....... ..160......... 170.........180.........190.
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Query Sequence  YIKALKAVLPSDIAVFAVGGV. TPENLAQWIDAG. CAGAGLGSDLYRAGQSVERTAQ
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Template Sequence  FVAGLKKLT. . TKPVVGVGRFTSPDAMVRQIKAGILDLIGAARPSIADPFLPNKIRD
Template Known Secondary structure  TTTGGG
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   285....290... ......300.........310.........320.........330.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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