Job Description Q6BF16 Confidence 97.42% Date Thu Jan 5 12:37:28 GMT 2012 Rank 199 Aligned Residues 151 % Identity 16% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	.	.	.	.	.	.	.	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	.	.	.	.	.	.	.	.	G	A	G	T	V	L	K
Query Conservation																																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	P	K	I	C	V	P	I	I	G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S
Template Known Secondary structure		S	S										S	S											T	T	T	S	S		S						G	G	G		T	T	T	T																	T	T	S									G	G	G	T		S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		70	.	.					.	.	.	.	.	.	.	80		.	.	.	.						.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110											.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.									.					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query SS confidence					.	.	.	.									.					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Query Sequence		P	E	Q	.	.	.	.	V	D	A	L	A	R	M	G	.	C	Q	L	I	.	.	.	.	.	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	.	.	.	.	.	.	.	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P
Query Conservation					.	.	.	.									.					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.									.					.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A	V
Template Known Secondary structure															T	S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.						.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	.	.	.	.	.	L	P	S	D	I	A	V	F	A	V	G
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.
Template Conservation
Template Sequence		M	P	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M	S
Template Known Secondary structure				S	S																	T	T		S	S		B
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions