Job Description Q6BF16 Confidence 96.76% Date Thu Jan 5 12:37:28 GMT 2012 Rank 238 Aligned Residues 199 % Identity 12% Template c3fk4A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:rubisco-like protein; PDBTitle: crystal structure of rubisco-like protein from bacillus2 cereus atcc 14579 Resolution 2.00 Å

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		6	.	.	.	10	.	.	.				.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.													.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.		.																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.		.																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	L	P	L	I	A	I	L	.	.	.	R	.	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	S	P	Q	W	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K
Query Conservation										.	.	.		.																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.		.																																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	P	L	L	M	S	I	F	K	G	M	I	G	R	N	I	G	Y	L	K	T	Q	L	R	D	Q	A	I	G	G	V	D	I	V	K	D	D	E	I	L	F	E	N	A	L	T	P	L	T	K	R	I	V	S	G	K	E	V	L	Q	S	V	Y	E	T	Y	G	H	K	T	L	Y	A	V	N	L	T	G	R
Template Known Secondary structure		S	S								S	S		T	T																T	T		S						T	T			S		S	S	S																																S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
						70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.						.	.	.	.	.	.	.	.	100	.	.	.	.	.	.															.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query SS confidence		.	.	.	.																							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Query Sequence		.	.	.	.	P	E	Q	V	D	A	L	A	R	M	G	C	Q	L	I	V	T	P	N	I	H	S	.	.	.	.	.	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	A	T	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L
Query Conservation		.	.	.	.																							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Alig confidence		.	.	.	.																							.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation
Template Sequence		T	F	D	L	K	E	N	A	K	R	A	V	Q	A	G	A	D	I	L	L	F	N	V	F	A	Y	G	L	D	V	L	Q	S	L	A	E	D	D	E	I	P	V	P	I	M	A	H	P	A	V	S	G	A	Y	S	A	S	K	L	Y	G	V	S	S	P	L	L	L	G	K	L	L	R	Y	A	G	A	D	F	S
Template Known Secondary structure		G	G	G												T		S																					T	T	S		S							T	T	T					S		S	S	S	S	B							T							T		S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150				.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																											.	.	.																		.											.
Query SS confidence																											.	.	.																		.											.
Query Sequence		K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	.	.	.	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	.	A	G	C	A	G	A	G	L	G	S	.	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y
Query Conservation																											.	.	.																		.											.
Alig confidence																											.	.	.																		.											.
Template Conservation
Template Sequence		L	F	P	S	P	Y	K	E	E	A	L	A	I	S	K	Y	L	T	E	D	D	A	S	F	K	K	S	F	S	V	P	S	A	G	I	H	P	G	F	V	P	F	I	V	R	D	F	G	K	D	V	V	I	N	A	G	G	G	I	H	G	H	P	N	G	A	Q	G	G	G	K	A	F	R	T	A	I	D	A	T
Template Known Secondary structure																				S			T	T	S									S	S			G	G	G										S	S	B					G	G	G	G	G	G	S	T	T
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.
		201	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	N	K
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		385	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions