|   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
. | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | |
|
. | . | . | 70 | . | . | . | |
|
|
|
. | . | . |
Predicted Secondary structure |   |
 |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
| . | . |
|
|
|  |  |  |  | . | . | . | . |  |  |  |
Query SS confidence |   |
|
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| . |
. |
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|
| . |
. |
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|
| . |
. |
. |
. |
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|
Query Sequence |   |
T | K | L | P | L | I | A | I | L | R | G | I | T | P | D | E | A | L | A | H | V | G | A | V | I | D | A | G | F | D | A | V | E | I | P | L | N | S | P | . |
. |
Q | W | E | Q | S | I | P | A | I | V | D | A | Y | G | D | K | A | L | I | G | A | G | T | . |
. |
V | L | K | P | E | Q | V | . |
. |
. |
. |
D | A | L |
Query Conservation |   |
  |   |   |
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|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|
|   |   |   |   |   |   | . | . |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   | . | . |   |   |   |   |   |   |   | . | . | . | . |   |   |
|
Alig confidence |   |
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| . | . |
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|
| . | . |
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|
| . | . | . | . |
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|
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|
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |
|   |
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|
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
T | P | R | P | I | A | S | S | V | G | A | K | S | V | E | E | T | R | A | V | I | D | R | Y | R | Q | R | G | Y | V | A | H | S | V | K | I | G | G | D | V | E | R | D | I | A | R | I | R | D | V | E | D | I | R | E | P | G | E | I | V | L | Y | D | V | N | R | G | W | T | R | Q | Q | A | L | R | V | M | R | A | T |
Template Known Secondary structure |   |
S |
|  |  | B | B |
|
| B |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
| T | T |
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
131 | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | |
|
. | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | |
. | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
. | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |
Query SS confidence |   |
|
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|
|
|
|
|
|
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|
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| . |
. |
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|
| . |
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|
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|
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|
|
| . |
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|
|
Query Sequence |   |
A | R | M | G | C | Q | L | I | V | T | P | N | I | H | S | E | V | I | R | R | A | V | G | Y | G | M | T | V | C | P | G | . |
. |
C | A | T | A | T | E | A | F | T | A | L | E | A | G | . |
A | Q | A | L | K | I | F | P | S | S | A | F | G | P | Q | Y | I | K | A | L | K | A | V | L | P | S | . |
D | I | A | V | F |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |
|   |
|   |   |
|   |   |   |
|   |   |   |
| . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . |   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
| . | . |
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| . |
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|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
Template Sequence |   |
E | D | L | H | V | M | F | E | Q | P | G | E | T | L | D | D | I | A | A | I | R | P | L | H | S | A | P | V | S | V | D | E | C | L | V | T | L | Q | D | A | A | R | V | A | R | D | G | L | A | E | V | F | G | I | K | L | N | R | V | G | G | L | T | R | A | A | R | M | R | D | I | A | L | T | H | G | I | D | M | F |
Template Known Secondary structure |   |
G | G | G | T |
|
|  |  |
|
| S | S | S |  |  |  |  |  |  | T | G | G | G |
|
|
|
|  |  |  |
| T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
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|
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|
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|
|
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|
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|
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|
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|
|
|
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|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
  |
  |   |
153 | . | . | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
Predicted Secondary structure |   |
 |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | G | G | V | . |
T | P | E | N | L | A | Q | W | I | D | A | G | C | A |
Query Conservation |   |
|   |
|
|
| . |
|   |   |   |
|   |   |   |
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|   |
Template Sequence |   |
V | M | A | T | G | G | S | V | L | A | D | A | E | A | L | H | L | A | A | T |
Template Known Secondary structure |   |
 |  |
| S | S |
| S |  |  |  |  |  |  |  |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
291 | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |