Job Description Q6BF16 Confidence 86.60% Date Thu Jan 5 12:37:28 GMT 2012 Rank 481 Aligned Residues 187 % Identity 15% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.											.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.																									.	.																		.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.																									.	.																		.	.	.
Query Sequence		G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	.	.	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R	M	.	.	.
Query Conservation																										.	.	.	.	.	.	.	.	.	.																									.	.																		.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.																									.	.																		.	.	.
Template Conservation
Template Sequence		P	V	T	P	D	E	V	A	Q	A	S	I	G	A	A	E	A	G	A	A	V	I	H	L	H	A	R	D	P	R	D	G	R	P	T	Q	D	P	A	A	F	A	E	F	L	P	R	I	K	S	N	T	D	A	V	I	N	L	T	T	G	G	S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	X	P
Template Known Secondary structure				S															T		S									T	T	T											T	T																	S		S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
																																							80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	C	Q	L	I	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	A	S	L	N	X	G	S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R	E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F	E	F	E	C	Y	D	T	S	H	L	Y	N	L	A	H	F	V	D
Template Known Secondary structure		S							S							G	G	G	G	G	T					S	S									G	G	G	G																			T	T	T									S
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
		123												.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.			.	180	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																													.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																													.	.
Query Sequence		Q	.	.	.	.	.	.	.	.	.	.	.	A	L	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	.	.	.	.	.	.	V	F	A	V	G	G	V	T	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	.	.	L	Y	R	A	G
Query Conservation			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																													.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.																						.							.	.
Template Conservation																																																																				.
Template Sequence		R	K	L	A	T	P	P	F	F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G	A	D	Y	V	W	S	I	L	G	A	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	.	V	R	V	G	L	E	D	S	L	W	I	A	P
Template Known Secondary structure		T	T		S		S	S								S		T	T	S																				G	G	G									G	G	G										T	T	T			.					T	T	T		S				T
Template Predicted Secondary structure																																																																				.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.
			184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		G	E	L	A	E	T	N	A	A	Q	V	R	K	I	R	Q	V	I	E	G
Template Known Secondary structure		T				S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions