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Job DescriptionQ6BF16
Confidence91.65%DateThu Jan 5 12:37:28 GMT 2012
Rank427Aligned Residues187
% Identity18%Templatec3e02A_
PDB info PDB header:metal binding proteinChain: A: PDB Molecule:uncharacterized protein duf849; PDBTitle: crystal structure of a duf849 family protein (bxe_c0271) from2 burkholderia xenovorans lb400 at 1.90 a resolution
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GITPDEALAHVGAVIDAGFDAVEI. . . . . . . . . . PLNSPQWEQSIPAIVDAYGDKALIGAGTVLKPEQVDALARM. . . . .
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Template Sequence  PITPEEIVKEGVAAAEAGAAXLHLHARDPLNGRPSQDPDLFXRFLPQLKERTDAILNITTGGGLGXSLDERLAPARAARP
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   27..30.........40.........50.........60.........70.........80.........90.........100......
 
   80.........90.........100.........110.........120..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GCQLIVTPNIHSEVIRRAVGYGMTVCPGCATATEAFTALEAGA
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Template Sequence  EVASXNXGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGXTELGASGTRFEFECYDVGHLYNLAHFVD
Template Known Secondary structure  S
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B
GGGGGG
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SSTTGGG



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   123 ......130.........140 .........150 .........160.........170........ .180...
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Query Sequence  Q. . . . . . . . . . . ALKIFPSSAFGPQYIKA. . . . LKAVLPSDIA. . VFAVGGVTPENLAQWIDAGCAGAGLGSD. . LYRAG
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Template Sequence  RKLVEPPFFLQCVFGILGGIGADPENLLHXRTIADRLFGQDYYLSVLAAGRHQXPFVTXSAILGGN. VRVGLEDSLYSGK
Template Known Secondary structure  TTSS
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BTS

S
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GGGTT
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   187..190.........200.........210.........220.........230.........240.........250.. .......260.....
 
   184.....190.........200..
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Query Sequence  . QSVERTAQQAAAFVKAYRE
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Template Sequence  GQLATSNAEQVRKIRRIIEE
Template Known Secondary structure  T
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   266...270.........280.....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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