Job Description Q6BF16 Confidence 95.31% Date Thu Jan 5 12:37:28 GMT 2012 Rank 297 Aligned Residues 147 % Identity 20% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E	Q	V	D	A	L	A	R
Query Conservation																																				.	.	.	.	.	.
Alig confidence											.																									.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																																												.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	R	A	T	V	V	A	G	I	.	G	Y	S	V	D	T	A	I	E	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	F	K	D	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	S	S							.		S	S														T	T		S										S																		S	S	S									T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.																																																												.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	C	Q	L	I	V	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A	F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	G	V	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	H	L	S	D	D	V	I	K	E	L	A	P	L	D	K	L	V	G	I	K	Y	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C	G	T	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	S		T							T	T		T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S		G	G	G							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A
Query Conservation
Alig confidence																								.
Template Conservation																								.
Template Sequence		E	K	W	A	P	F	F	Y	H	A	G	A	V	G	F	T	S	G	L	V	N	V	.	F	P	Q	K	S	F	A	L	L	E	A	L	E	E
Template Known Secondary structure												T							S	G	G	G	T	.
Template Predicted Secondary structure																								.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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