Job Description Q6BF16 Confidence 98.12% Date Thu Jan 5 12:37:28 GMT 2012 Rank 180 Aligned Residues 197 % Identity 12% Template c3bvjA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: crystal structure of human orotidine 5'-monophosphate decarboxylase2 complexed with xmp Resolution 1.80 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.																			.	.											.
Query SS confidence																																								.	.																			.	.											.
Query Sequence		Q	T	K	L	P	L	I	A	I	L	R	G	I	T	P	D	E	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	P	L	N	.	.	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	.	.	A	L	I	G	A	G	T	V	L	K	.	P	E	Q	V	D	A	L	A	R
Query Conservation																																								.	.																			.	.											.
Alig confidence																														.										.	.																			.	.											.
Template Conservation																														.
Template Sequence		K	K	E	T	N	L	C	L	S	A	D	V	S	L	A	R	E	L	L	Q	L	A	D	A	L	G	P	S	.	I	C	M	L	K	T	H	V	D	I	L	N	D	F	T	L	D	V	M	K	E	L	I	T	L	A	K	C	H	E	F	L	I	F	E	D	R	K	F	A	D	I	G	N	T	V	K	K	Q	Y	E
Template Known Secondary structure				T										S													G	G	G	.		S						G	G	G		T	T																	T											S
Template Predicted Secondary structure																														.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
									79	80	.	.	.	.	.						.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110															.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.								.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.								.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	M	G	C	Q	L	I	V	.	.	.	.	.	T	P	N	I	H	S	E	V	I	R	R	A	V	G	Y	G	M	T	V	C	P	G	C	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	E	A	F	T	A	L	E	A	G	A	Q	A	L	K	I	F	P	S	S	A
Query Conservation		.	.	.	.	.	.	.								.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.								.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	I	F	K	I	A	S	W	A	D	L	V	N	A	H	V	V	P	G	S	G	V	V	K	G	L	Q	E	V	G	L	P	L	H	R	G	C	L	L	I	A	E	M	S	S	T	G	S	L	A	T	G	D	Y	T	R	A	A	V	R	M	A	E	E	H	S	E	F	V	V	G	F	I	S	G	S	R	V	S
Template Known Secondary structure		S	T	T	T		G	G	G	T		S						S	T	T		T											T	T	T	T											S	T	T																		T	T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																									.												.
Query SS confidence																									.												.
Query Sequence		F	G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	V	G	.	G	V	T	P	E	N	L	A	Q	W	I	.	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	G	Q	S	V	E	R	T	A	Q	Q	A	A	A	F	V	K	A	Y	R	E	A	V
Query Conservation																									.												.
Alig confidence							.	.	.																.												.
Template Conservation							.	.	.
Template Sequence		M	K	P	E	F	.	.	.	L	H	L	T	P	G	V	Q	L	E	A	G	G	D	N	L	G	Q	Q	Y	N	S	P	Q	E	V	I	G	K	R	G	S	D	I	I	I	V	G	R	G	I	I	S	A	A	D	R	L	E	A	A	E	M	Y	R	K	A	A	W	E	A	Y	L	S	R	L
Template Known Secondary structure				T	T	S	.	.	.						S	B		S	S			B		T	T	S		B		B								T	T			S					S					T	S	S
Template Predicted Secondary structure							.	.	.
Template SS confidence
		219	220	.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions